Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05188 and RBAM_031630

See DNA alignment / Visit BSNT_05188 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:40
# Commandline: needle
#    -asequence pep-align/BSNT_05188___yveO.1.9828.seq
#    -bsequence pep-align/RBAM_031630___epsE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05188___yveO-RBAM_031630___epsE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05188___yveO-RBAM_031630___epsE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05188___yveO
# 2: RBAM_031630___epsE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity:     230/280 (82.1%)
# Similarity:   250/280 (89.3%)
# Gaps:           2/280 ( 0.7%)
# Score: 1213.5
# 
#
#=======================================

BSNT_05188___      1 MNSG--PKVSVIMGIYNCERTLAESIESILSQSYKNWELILCDDASTDGT     48
                     ||:|  ||:||||||||||.||||||||||||||||||||:|||||||||
RBAM_031630__      1 MNAGAQPKISVIMGIYNCEETLAESIESILSQSYKNWELIMCDDASTDGT     50

BSNT_05188___     49 LRIAKQYAAHYSDCIKLIQNKTNKRLAASLNHCLSHATGDYIARQDGDDL     98
                     .:||::||.||.|.|.|||||||:|||||||.||::|||||||||||||:
RBAM_031630__     51 YQIARRYADHYGDRITLIQNKTNQRLAASLNRCLTYATGDYIARQDGDDI    100

BSNT_05188___     99 SFPRRLEKQVAFLEKHRHYQVVGTGMLVFDEFGVRGTRILPSVPEPGIMA    148
                     |.|||||||.|||.||.|||||||||||||||||||.|:||.||:|||||
RBAM_031630__    101 SNPRRLEKQAAFLNKHAHYQVVGTGMLVFDEFGVRGARLLPPVPKPGIMA    150

BSNT_05188___    149 KGTPFCHGTIMMRASAYRTLKGYLSVRRTRRMEDIDLWLRFFEEGFRGYN    198
                     ||||||||||||||.||:.|.||.|||||||||||||||||||.||||||
RBAM_031630__    151 KGTPFCHGTIMMRAEAYKALGGYRSVRRTRRMEDIDLWLRFFEAGFRGYN    200

BSNT_05188___    199 LQEALYKVREDSDAFKRRSFTYSIDNAILVYQACRRLKLPLSDYIYIAKP    248
                     |||.|||||||||||||||||||||||:||:|||||||||||.|.|||||
RBAM_031630__    201 LQETLYKVREDSDAFKRRSFTYSIDNAVLVFQACRRLKLPLSHYAYIAKP    250

BSNT_05188___    249 LIRAFMPAAVMDRYHKKRVMNQQEGLVKHE    278
                     ||||..|.|||:||||.|.:.|:|||.:|:
RBAM_031630__    251 LIRAITPPAVMNRYHKNRDIRQKEGLAEHD    280


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