Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05140 and RBAM_031350

See DNA alignment / Visit BSNT_05140 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:37
# Commandline: needle
#    -asequence pep-align/BSNT_05140___yvbU.1.9828.seq
#    -bsequence pep-align/RBAM_031350___yvbU.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05140___yvbU-RBAM_031350___yvbU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05140___yvbU-RBAM_031350___yvbU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05140___yvbU
# 2: RBAM_031350___yvbU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity:     230/292 (78.8%)
# Similarity:   267/292 (91.4%)
# Gaps:           0/292 ( 0.0%)
# Score: 1181.0
# 
#
#=======================================

BSNT_05140___      1 MTITQLKVFVKIAETGSFTKAGQALNMTQPAVSHAISAIEAELDVKLIIR     50
                     ||||||:|||:|||||||||||||||||||||||||||:|:||.:|||||
RBAM_031350__      1 MTITQLRVFVQIAETGSFTKAGQALNMTQPAVSHAISALESELGIKLIIR     50

BSNT_05140___     51 DRRNGLMLTDTGKQILVHIREVLKGIEKVEQVAAAEKGLELGTIHIGTFS    100
                     :||||:.|||||.:||||||||||||||.||:||||:|||.||||||||.
RBAM_031350__     51 ERRNGVRLTDTGGKILVHIREVLKGIEKAEQLAAAERGLEQGTIHIGTFP    100

BSNT_05140___    101 TASAYFMPKLISEFKQKYPKLELVLHEGTVNEVKEWLHTRMIDVGILLYP    150
                     .|||||:|||||.||::||||||||||||||||||||.:|:|||||.|:|
RBAM_031350__    101 AASAYFIPKLISVFKKRYPKLELVLHEGTVNEVKEWLRSRVIDVGITLFP    150

BSNT_05140___    151 TEEMEYIHLKKDKMAVVLRDDHPLAGHSAITLKDLDHEPMIVCDGGYESP    200
                     ||:|||:.|||||||||||:||||.|..:|||||||.:|||:||||||||
RBAM_031350__    151 TEDMEYLPLKKDKMAVVLRNDHPLCGCESITLKDLDRQPMIICDGGYESP    200

BSNT_05140___    201 FVDMFRQAGATLHPAFTVYNINTSISMIREGLGLAILSEMSMSGMPLPEH    250
                     |:|||::||:.|..||||||:|||||||:||||:||||:|||||:.|||:
RBAM_031350__    201 FIDMFKEAGSVLTAAFTVYNVNTSISMIKEGLGIAILSQMSMSGISLPEN    250

BSNT_05140___    251 VVTRELDPQVYRDVQLAVPSLKEASLAAKLFIEMAKELFGAE    292
                     ||||||:..|||||.|||||:|||||||||||::|:||...|
RBAM_031350__    251 VVTRELNQAVYRDVLLAVPSIKEASLAAKLFIQIAQELTKNE    292


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