Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05131 and RBAM_031270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:36
# Commandline: needle
# -asequence pep-align/BSNT_05131___pgm.1.9828.seq
# -bsequence pep-align/RBAM_031270___pgm2.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05131___pgm-RBAM_031270___pgm2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05131___pgm-RBAM_031270___pgm2.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05131___pgm
# 2: RBAM_031270___pgm2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 511
# Identity: 489/511 (95.7%)
# Similarity: 504/511 (98.6%)
# Gaps: 0/511 ( 0.0%)
# Score: 2567.0
#
#
#=======================================
BSNT_05131___ 1 MSKKPAALIILDGFGLRNETVGNAVALAKKPNFDRYWNQYPHQTLTASGE 50
||||||||||||||||||||||||||.|||||||||||||||||||||||
RBAM_031270__ 1 MSKKPAALIILDGFGLRNETVGNAVAQAKKPNFDRYWNQYPHQTLTASGE 50
BSNT_05131___ 51 AVGLPEGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFERNQTFLDA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_031270__ 51 AVGLPEGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFERNQTFLDA 100
BSNT_05131___ 101 ISNAKENNKALHLFGLLSDGGVHSHINHLFALLKLAKKEGLTEVYIHGFL 150
|.|||:|:|||||||||||||||||||||||||||||.||||:|||||||
RBAM_031270__ 101 IKNAKDNDKALHLFGLLSDGGVHSHINHLFALLKLAKSEGLTKVYIHGFL 150
BSNT_05131___ 151 DGRDVGPQTAKTYINQLNDQIKEIGVGEIASISGRYYSMDRDKRWDRVEK 200
||||||||||||||.|||:|::||||||||||||||||||||||||||||
RBAM_031270__ 151 DGRDVGPQTAKTYIQQLNEQVEEIGVGEIASISGRYYSMDRDKRWDRVEK 200
BSNT_05131___ 201 AYRAMAYGEGPSYRSALDVVDDSYANGIYDEFVIPSVITKENGEPVAKIQ 250
||||||||||||||||:|||||||||||:||||||||||||||||||||.
RBAM_031270__ 201 AYRAMAYGEGPSYRSAMDVVDDSYANGIHDEFVIPSVITKENGEPVAKIH 250
BSNT_05131___ 251 DGDSVIFYNFRPDRAIQISNTFTNKDFRDFDRGENYPKNLYFVCLTHFSE 300
|||||||||||||||||||||||||||||||||||:||||||||||||||
RBAM_031270__ 251 DGDSVIFYNFRPDRAIQISNTFTNKDFRDFDRGENHPKNLYFVCLTHFSE 300
BSNT_05131___ 301 TVDGYVAFKPINLDNTVGEVLSQHGLKQLRIAETEKYPHVTFFMSGGREA 350
:|||||||||:||||||||||:|||||||||||||||||||||||||||.
RBAM_031270__ 301 SVDGYVAFKPVNLDNTVGEVLAQHGLKQLRIAETEKYPHVTFFMSGGREE 350
BSNT_05131___ 351 EFPGEERILINSPKVATYDLKPEMSAYEVKDALVKEIEADKHDAIILNFA 400
|||||||||||||||||||||||||||||||||||||.||||||||||||
RBAM_031270__ 351 EFPGEERILINSPKVATYDLKPEMSAYEVKDALVKEIAADKHDAIILNFA 400
BSNT_05131___ 401 NPDMVGHSGMVEPTIKAIEAVDECLGEVVDAILAKGGHAIITADHGNADI 450
||||||||||||||||||||||||||||||||:|||||||||||||||||
RBAM_031270__ 401 NPDMVGHSGMVEPTIKAIEAVDECLGEVVDAIIAKGGHAIITADHGNADI 450
BSNT_05131___ 451 LITESGEPHTAHTTNPVPVIVTKEGITLREGGILGDLAPTLLDLLGVEKP 500
||||:||||||||||||||||||||:||||||||||||||||||||||||
RBAM_031270__ 451 LITETGEPHTAHTTNPVPVIVTKEGVTLREGGILGDLAPTLLDLLGVEKP 500
BSNT_05131___ 501 KEMTGTSLIQK 511
|||||||||||
RBAM_031270__ 501 KEMTGTSLIQK 511
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