Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05004 and RBAM_030700

See DNA alignment / Visit BSNT_05004 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:33
# Commandline: needle
#    -asequence pep-align/BSNT_05004___yvgZ.1.9828.seq
#    -bsequence pep-align/RBAM_030700___yvgZ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05004___yvgZ-RBAM_030700___yvgZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05004___yvgZ-RBAM_030700___yvgZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05004___yvgZ
# 2: RBAM_030700___yvgZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 101
# Identity:      83/101 (82.2%)
# Similarity:    93/101 (92.1%)
# Gaps:           0/101 ( 0.0%)
# Score: 434.0
# 
#
#=======================================

BSNT_05004___      1 MEKHNEHKTLNHKSSKEKDQITNRLKRIEGQVRGIQNMVENDRYCVDILV     50
                     |:||.||::|||||:||||||.|||||||||||||||||:|:||||||||
RBAM_030700__      1 MDKHTEHQSLNHKSAKEKDQILNRLKRIEGQVRGIQNMVDNERYCVDILV     50

BSNT_05004___     51 QISAVQAAMKNVALHLLEDHAHHCVADAIKSGDGEQAISELLDVFKKFTK    100
                     |||||||||:.||.||||||||||||.||:||:|||||:|||||.||..|
RBAM_030700__     51 QISAVQAAMQKVAFHLLEDHAHHCVAGAIESGNGEQAIAELLDVVKKIAK    100

BSNT_05004___    101 S    101
                     |
RBAM_030700__    101 S    101


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