Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04999 and RBAM_030670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:32
# Commandline: needle
# -asequence pep-align/BSNT_04999___copB.1.9828.seq
# -bsequence pep-align/RBAM_030670___yvgW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04999___copB-RBAM_030670___yvgW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04999___copB-RBAM_030670___yvgW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04999___copB
# 2: RBAM_030670___yvgW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 703
# Identity: 543/703 (77.2%)
# Similarity: 615/703 (87.5%)
# Gaps: 4/703 ( 0.6%)
# Score: 2776.0
#
#
#=======================================
BSNT_04999___ 1 ---MKQEYVLDGLDCSNCAQKIENGVKGIKGIDGCAVNFAASTLTVSADG 47
.|.|:|||||||||||:|||||||.|.|||||||||||||:||||.|
RBAM_030670__ 1 MKAAKGEFVLDGLDCSNCAKKIENGVKAIDGIDGCAVNFAASTITVSAGG 50
BSNT_04999___ 48 KEEQWVTNKVEKKVKSIDPHVTVRQKHIKKSADDGYRNRMVNMLIRMAAA 97
|.|||:.::|.|||||||||||||.||..|..:|.||.::..||:|:||.
RBAM_030670__ 51 KNEQWMKDEVAKKVKSIDPHVTVRSKHEDKPGEDEYRKKLQLMLVRLAAG 100
BSNT_04999___ 98 VILGATAYLVHSGTI-ELFLFLAAYLIIGGDIMIRAVKNIIRGQVFDEHF 146
.:|...||..|:|.: |..||.|:||||||||:.||.|||:|||||||||
RBAM_030670__ 101 AVLAVIAYFAHTGAVLEFLLFFASYLIIGGDIVARAGKNIVRGQVFDEHF 150
BSNT_04999___ 147 LMALATIGAFLIQQYPEGVAVMLFYQIGELFQGAAVSRSRKSISALMDIR 196
||||||||||:|.|||||||||||||||||||||||||||||||||:|||
RBAM_030670__ 151 LMALATIGAFMIHQYPEGVAVMLFYQIGELFQGAAVSRSRKSISALLDIR 200
BSNT_04999___ 197 PDYANLKTKNGIEQVSPEDVQTGDIIVVNPGESIPLDGKVVQGSAMVDTS 246
|:|||:||:||:..|.|:||:.|.:|||||||.|||||||:.||:|||||
RBAM_030670__ 201 PEYANVKTENGMTAVPPQDVKVGQVIVVNPGERIPLDGKVLSGSSMVDTS 250
BSNT_04999___ 247 ALTGESVPRKAAVGQDVMSGFINQNGVLHIEVTKSYQESAVSKILDLVQN 296
|||||||||||..|||||:||:|||||||||.:|.|::||||||||||:|
RBAM_030670__ 251 ALTGESVPRKAEPGQDVMAGFMNQNGVLHIETSKGYEDSAVSKILDLVEN 300
BSNT_04999___ 297 ASSRKARTENFITKFAKYYTPAVVIIAVLLAFVPPLVLSGAALSDWVYRA 346
|:.|||:|||||:||||||||||||:||||||:|||::..||||||||||
RBAM_030670__ 301 AAGRKAKTENFISKFAKYYTPAVVIVAVLLAFLPPLLVPSAALSDWVYRA 350
BSNT_04999___ 347 LIFLVISCPCALVVSIPLGFFGGIGAASKAGVLVKGSNYLEALNQVKYAV 396
||||||||||||||||||||||||||||||||||||||||||||||.|||
RBAM_030670__ 351 LIFLVISCPCALVVSIPLGFFGGIGAASKAGVLVKGSNYLEALNQVAYAV 400
BSNT_04999___ 397 FDKTGTLTKGSFEVTEIKPAEGFTKDRLLEAAAYAELHSQHPIAESVRKA 446
||||||||||:|.||:||||.|||||.||.|||.||:||.||||.|:|:|
RBAM_030670__ 401 FDKTGTLTKGNFAVTDIKPAAGFTKDSLLHAAALAEVHSNHPIASSIREA 450
BSNT_04999___ 447 YGKMLSSDEIESYEEISGHGIFAKVNGNEILAGNKKLMEREQIEDVPDEN 496
|.:.||::|||.||||.||||..|..|:.|||||:|||.:|||.....||
RBAM_030670__ 451 YNQPLSAEEIEEYEEIPGHGIRVKTGGSTILAGNQKLMAKEQIASGTAEN 500
BSNT_04999___ 497 AGTIVHVAVDQRYAGAIIIADEIKEDAAQAVADLKSLGIKQTAMLTGDSK 546
.||:|:|||||:|||||:|||||||||.||:|:||:||:|:|.|||||||
RBAM_030670__ 501 NGTVVYVAVDQQYAGAIVIADEIKEDAKQAIANLKALGVKRTVMLTGDSK 550
BSNT_04999___ 547 QTGEAVGKQLGIGEVYAELLPQDKVAQVEALEAKLSPNEKLIFVGDGIND 596
|||||||::|||.:||.||||.|||.:||.|||.|.|||||:||||||||
RBAM_030670__ 551 QTGEAVGRELGIDDVYTELLPGDKVDRVEELEAALLPNEKLMFVGDGIND 600
BSNT_04999___ 597 TPVLARADIGIAMGGLGSDAAVEAADIVLMTDQPSKIAEAIRIAKRTRRI 646
||||||||||.|||.|||||||||||:|||||||||.|||||||:|||||
RBAM_030670__ 601 TPVLARADIGAAMGALGSDAAVEAADVVLMTDQPSKAAEAIRIARRTRRI 650
BSNT_04999___ 647 VWQNIGFALGVKAIFLILGAFGIATMWEAVFSDVGVTLLAVANAMRVMRL 696
||||||||||||.|||:|||||.|||||||||||||||:||||||||||:
RBAM_030670__ 651 VWQNIGFALGVKIIFLLLGAFGFATMWEAVFSDVGVTLIAVANAMRVMRV 700
BSNT_04999___ 697 KNK 699
|.:
RBAM_030670__ 701 KAE 703
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