Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04969 and RBAM_030440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:30
# Commandline: needle
# -asequence pep-align/BSNT_04969___fhuD.1.9828.seq
# -bsequence pep-align/RBAM_030440___fhuD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04969___fhuD-RBAM_030440___fhuD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04969___fhuD-RBAM_030440___fhuD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04969___fhuD
# 2: RBAM_030440___fhuD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity: 262/315 (83.2%)
# Similarity: 288/315 (91.4%)
# Gaps: 3/315 ( 1.0%)
# Score: 1397.0
#
#
#=======================================
BSNT_04969___ 1 MTHIYKKLGAAFFALLLIAALAACGNNSESKGSASDSKGAETFTYKAENG 50
|.|.|||:|||..|:|||||||||||:|::||| |:..||.|||||||
RBAM_030440__ 1 MFHTYKKIGAALIAMLLIAALAACGNSSDTKGS---SEKEETITYKAENG 47
BSNT_04969___ 51 NVKIPKHPKRVVVMADGYYGYFKTLGINVVGAPENVFKNPYYKGKTDGVE 100
|:||||||||||||||||||.||.|||||||||:||||||||||||.||.
RBAM_030440__ 48 NIKIPKHPKRVVVMADGYYGDFKQLGINVVGAPQNVFKNPYYKGKTKGVT 97
BSNT_04969___ 101 NIGDGTSVEKVIDLNPDLIIVWTTQGADIKKLEKIAPTVAVKYDKLDNIE 150
||||||||||:|||.||||:|||||||||:||||||||:|:|||||.||:
RBAM_030440__ 98 NIGDGTSVEKIIDLKPDLIVVWTTQGADIEKLEKIAPTIAIKYDKLSNID 147
BSNT_04969___ 151 QLKEFAKMTGTEDKAEKWLAEWDKKVAAAKTKIKKAVGDKTISIMQTNGK 200
|.|||||||||||||:|||||||||.||||||::||||.|||||||||||
RBAM_030440__ 148 QFKEFAKMTGTEDKADKWLAEWDKKTAAAKTKVQKAVGSKTISIMQTNGK 197
BSNT_04969___ 201 DIYVFGKDFGRGGSIIYKDLGLQATKLTKEKAIDQGPGYTSISLEKLPDF 250
|||||||||||||||||..|||:|||||:||||:|||||.||||||||||
RBAM_030440__ 198 DIYVFGKDFGRGGSIIYDKLGLKATKLTQEKAINQGPGYASISLEKLPDF 247
BSNT_04969___ 251 AGDYIFAGPWQSGGDDGGVFDSSIWKNLNAVKNGHVYKIDPIGFYFTDPI 300
||||||.||||:||||.||.||||||||:|||..|||:||||||||:|||
RBAM_030440__ 248 AGDYIFMGPWQAGGDDKGVLDSSIWKNLDAVKQNHVYRIDPIGFYFSDPI 297
BSNT_04969___ 301 SLEGQLEYITESLTK 315
||||||:|||:||||
RBAM_030440__ 298 SLEGQLDYITKSLTK 312
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