Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04884 and RBAM_030050

See DNA alignment / Visit BSNT_04884 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:25
# Commandline: needle
#    -asequence pep-align/BSNT_04884.1.9828.seq
#    -bsequence pep-align/RBAM_030050___yusU.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04884-RBAM_030050___yusU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04884-RBAM_030050___yusU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04884
# 2: RBAM_030050___yusU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 81
# Identity:      67/81 (82.7%)
# Similarity:    75/81 (92.6%)
# Gaps:           0/81 ( 0.0%)
# Score: 369.0
# 
#
#=======================================

BSNT_04884         1 MEQKLQEQLDGLLEKYTELLLGETNDELKEEVKQWILYTHIAKSMPPLAK     50
                     ||:|||:||||||||||||||||||.::||||:|||||||||||||||.|
RBAM_030050__      1 MEEKLQQQLDGLLEKYTELLLGETNPDVKEEVRQWILYTHIAKSMPPLVK     50

BSNT_04884        51 HWNATYPDAKQGIKEIIQHIKELNEAHRNKQ     81
                     |||.:|||||:|||..|||||:||||||.||
RBAM_030050__     51 HWNQSYPDAKEGIKAAIQHIKQLNEAHRKKQ     81


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