Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04872 and RBAM_029940

See DNA alignment / Visit BSNT_04872 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:24
# Commandline: needle
#    -asequence pep-align/BSNT_04872___yusM.1.9828.seq
#    -bsequence pep-align/RBAM_029940___yusM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04872___yusM-RBAM_029940___yusM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04872___yusM-RBAM_029940___yusM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04872___yusM
# 2: RBAM_029940___yusM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 302
# Identity:     227/302 (75.2%)
# Similarity:   257/302 (85.1%)
# Gaps:           0/302 ( 0.0%)
# Score: 1150.0
# 
#
#=======================================

BSNT_04872___      1 MLRHVFLFLSQNKTLTKFAKAYGTRLGARRFVAGDTIESAVKTVKRLNRS     50
                     |||.:.||||:||.|||||:|||.|.||.|||||:|:..|||||||||:.
RBAM_029940__      1 MLRSICLFLSKNKMLTKFAQAYGIRFGAGRFVAGETLTEAVKTVKRLNQK     50

BSNT_04872___     51 GLCATIDYLGEYAASEKEANQVAEECKKAIQAIAEHQLDSELSLKLTSIG    100
                     ||.|:||||||||.|||:|.:.||||||||:||||:|||.||||||||||
RBAM_029940__     51 GLSASIDYLGEYAGSEKDAKRTAEECKKAIRAIAENQLDCELSLKLTSIG    100

BSNT_04872___    101 LDLSEELALTHLRAILSVAKQYDVAVTIDMEDYSHYEQTLSIYRQCKQEF    150
                     ||:||:||..|:|.||:.||:..|.|||||||||...:||.:|::||.:|
RBAM_029940__    101 LDISEKLAEQHVRDILTEAKERCVPVTIDMEDYSRCSRTLELYKRCKPDF    150

BSNT_04872___    151 EKLGTVIQAYLYRAAEDIRKMRDLKPNLRLVKGAYKESAAVAFPDKRGTD    200
                     ..||||||||||||||||..:...||.|||||||||||||||||||:.||
RBAM_029940__    151 PVLGTVIQAYLYRAAEDISGLMPYKPRLRLVKGAYKESAAVAFPDKKATD    200

BSNT_04872___    201 LHFQSLIKLQLLSGNYTAVATHDDDIIKFTKQLVAEHRIPASQFEFQMLY    250
                     ||||.|||||||||:.|||||||||||.:||.|::||:||..||||||||
RBAM_029940__    201 LHFQQLIKLQLLSGHETAVATHDDDIISYTKTLISEHQIPREQFEFQMLY    250

BSNT_04872___    251 GIRPERQKELAKEGYRMRVYVPYGTDWFSYFMRRIAERPANAAFVLKGIL    300
                     |||.|||||||:|||||||||||||||:.|.||||||||||||||||||.
RBAM_029940__    251 GIRTERQKELAEEGYRMRVYVPYGTDWYGYLMRRIAERPANAAFVLKGIF    300

BSNT_04872___    301 KK    302
                     ||
RBAM_029940__    301 KK    302


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