Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04863 and RBAM_029890

See DNA alignment / Visit BSNT_04863 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:24
# Commandline: needle
#    -asequence pep-align/BSNT_04863___yusI.1.9828.seq
#    -bsequence pep-align/RBAM_029890___yusI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04863___yusI-RBAM_029890___yusI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04863___yusI-RBAM_029890___yusI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04863___yusI
# 2: RBAM_029890___yusI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 118
# Identity:     104/118 (88.1%)
# Similarity:   111/118 (94.1%)
# Gaps:           0/118 ( 0.0%)
# Score: 568.0
# 
#
#=======================================

BSNT_04863___      1 MSLTFYWYPKCGTCRKAKKWLEEHGKEINEIHIAEQPPSKEELKALYEKS     50
                     |||.|||||||||||.||||||:.|||||||||||:.|||||:|.|||||
RBAM_029890__      1 MSLNFYWYPKCGTCRNAKKWLEDRGKEINEIHIAEETPSKEEIKDLYEKS     50

BSNT_04863___     51 GLDLKKFFNTSGMKYRELNLKEKLYHMSEDEQLELLASDGMLIKRPLTTD    100
                     ||:|||||||||||||||||||||||||||||||||||||||:|||:|||
RBAM_029890__     51 GLELKKFFNTSGMKYRELNLKEKLYHMSEDEQLELLASDGMLLKRPITTD    100

BSNT_04863___    101 GEKVTVGFKEDQFEENWA    118
                     ||||||||||||||:.|.
RBAM_029890__    101 GEKVTVGFKEDQFEKYWM    118


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