Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04859 and RBAM_029850

See DNA alignment / Visit BSNT_04859 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:23
# Commandline: needle
#    -asequence pep-align/BSNT_04859___yusE.1.9828.seq
#    -bsequence pep-align/RBAM_029850___yusE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04859___yusE-RBAM_029850___yusE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04859___yusE-RBAM_029850___yusE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04859___yusE
# 2: RBAM_029850___yusE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 106
# Identity:      87/106 (82.1%)
# Similarity:    97/106 (91.5%)
# Gaps:           0/106 ( 0.0%)
# Score: 463.0
# 
#
#=======================================

BSNT_04859___      1 MKELQEHELDHIEDDVYLLYLYTPFCGTCQLASKMLTVVKEMLPDVAFYQ     50
                     ||||||:||:.|:||||||||||||||||||||||||||:||||..|||:
RBAM_029850__      1 MKELQENELESIQDDVYLLYLYTPFCGTCQLASKMLTVVEEMLPGAAFYK     50

BSNT_04859___     51 NNVNYSPTFAKAYQIESVPCFLLFKGGKVVERGYAFHSVSYLYELIKQKS    100
                     |||||||.|||||||||||||||||||::||:||||.||||||||||||:
RBAM_029850__     51 NNVNYSPAFAKAYQIESVPCFLLFKGGELVEKGYAFRSVSYLYELIKQKT    100

BSNT_04859___    101 SSASHL    106
                     |....:
RBAM_029850__    101 SQTFPM    106


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