Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04842 and RBAM_029760

See DNA alignment / Visit BSNT_04842 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:22
# Commandline: needle
#    -asequence pep-align/BSNT_04842___yurV.1.9828.seq
#    -bsequence pep-align/RBAM_029760___yurV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04842___yurV-RBAM_029760___yurV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04842___yurV-RBAM_029760___yurV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04842___yurV
# 2: RBAM_029760___yurV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 147
# Identity:     139/147 (94.6%)
# Similarity:   145/147 (98.6%)
# Gaps:           0/147 ( 0.0%)
# Score: 721.0
# 
#
#=======================================

BSNT_04842___      1 MSFNANLDTLYRQVIMDHYKNPRNKGVLNDSIVVDMNNPTCGDRIRLTMK     50
                     ||||||||||||||||||||||||||||:|||||||||||||||||||||
RBAM_029760__      1 MSFNANLDTLYRQVIMDHYKNPRNKGVLDDSIVVDMNNPTCGDRIRLTMK     50

BSNT_04842___     51 LDGDIVEDAKFEGEGCSISMASASMMTQAIKGKDIETALSMSKIFSDMMQ    100
                     ||||.|::|||||||||||||||||||||||||||:||||||||||||||
RBAM_029760__     51 LDGDTVQEAKFEGEGCSISMASASMMTQAIKGKDIDTALSMSKIFSDMMQ    100

BSNT_04842___    101 GKEYDDSIDLGDIEALQGVSKFPARIKCATLSWKALEKGVAKQEGGN    147
                     |||||||||||||||||||||||||||||||||||||||||.::|||
RBAM_029760__    101 GKEYDDSIDLGDIEALQGVSKFPARIKCATLSWKALEKGVAGEKGGN    147


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