Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02915 and RBAM_029730

See DNA alignment / Visit BSNT_02915 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:47
# Commandline: needle
#    -asequence pep-align/BSNT_02915.1.9828.seq
#    -bsequence pep-align/RBAM_029730___yncE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02915-RBAM_029730___yncE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02915-RBAM_029730___yncE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02915
# 2: RBAM_029730___yncE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 153
# Identity:      38/153 (24.8%)
# Similarity:    51/153 (33.3%)
# Gaps:          85/153 (55.6%)
# Score: 206.0
# 
#
#=======================================

BSNT_02915         0 --------------------------------------------------      0
                                                                       
RBAM_029730__      1 MKRGITFDIPNEFGRFAADILQPFPISSYTWFIGDGEAYTEFKEGIDTDL     50

BSNT_02915         1 -----------------------------------MVNQVNTYEEFADSD     15
                                                        ||.::|||||:.:|.
RBAM_029730__     51 FSQNQRIIQGQELRQRLEGYPYYMIFAELKAFPGGMVTEINTYEEYLESS    100

BSNT_02915        16 CELVLLIADNSYVSIYCKNKKFIEKLYFNALQNDFEDVQFITDENDTRTS     65
                     |||||||||.|||::|||:...:|.|:..|:|..|..|.::|||||.||.
RBAM_029730__    101 CELVLLIADCSYVTLYCKDPDMLEALFQQAVQCGFHRVDYVTDENDARTG    150

BSNT_02915        66 LTV     68
                     |:|
RBAM_029730__    151 LSV    153


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