Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04832 and RBAM_029670

See DNA alignment / Visit BSNT_04832 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:22
# Commandline: needle
#    -asequence pep-align/BSNT_04832___yurP.1.9828.seq
#    -bsequence pep-align/RBAM_029670___yurP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04832___yurP-RBAM_029670___yurP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04832___yurP-RBAM_029670___yurP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04832___yurP
# 2: RBAM_029670___yurP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 328
# Identity:     284/328 (86.6%)
# Similarity:   306/328 (93.3%)
# Gaps:           0/328 ( 0.0%)
# Score: 1482.0
# 
#
#=======================================

BSNT_04832___      1 MSQATAKVNREVQAFLQDLKGKTIDHVFFVACGGSSAIMYPSKYVFDRES     50
                     |||..|:||.:|||||.||||||||||||||||||||||||||||||||:
RBAM_029670__      1 MSQTAAQVNHKVQAFLDDLKGKTIDHVFFVACGGSSAIMYPSKYVFDREA     50

BSNT_04832___     51 KSINSDLYSANEFIQRNPVQLGEKSLVILCSHSGNTPETVKAAAFARGKG    100
                     |:|:|||||:|||||||||||||.|||||||.|||||||||||.|||.||
RBAM_029670__     51 KAISSDLYSSNEFIQRNPVQLGENSLVILCSQSGNTPETVKAAGFARKKG    100

BSNT_04832___    101 ALTIAMTFKPESPLAQEAQYVAQYDWGDEALAINTNYGVLYQIVFGTLQV    150
                     ||||||||:|:||||:||:|||.||||:.|.|||.|||||||||||.|.|
RBAM_029670__    101 ALTIAMTFEPDSPLAKEAEYVAVYDWGENAQAINMNYGVLYQIVFGALHV    150

BSNT_04832___    151 LENNTKFEQAIEGLDQLQAVYEKALKQEADNAKQFAKAHEKESIIYTMAS    200
                     |||:..|||||:||::||.||:||||||||:||.||||||||.|||||||
RBAM_029670__    151 LENHPVFEQAIDGLNKLQTVYDKALKQEADHAKAFAKAHEKEDIIYTMAS    200

BSNT_04832___    201 GANYGVAYSYSICILMEMQWIHSHAIHAGEYFHGPFEIIDESVPFIILLG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_029670__    201 GANYGVAYSYSICILMEMQWIHSHAIHAGEYFHGPFEIIDESVPFIILLG    250

BSNT_04832___    251 LDETRPLEERALTFSKKYGKKLTVLDAASYDFTAIDDSVKGYLSPLVLNR    300
                     ||||||||||||:|||:|||||||||||:|||:.|||||||||:||||||
RBAM_029670__    251 LDETRPLEERALSFSKRYGKKLTVLDAAAYDFSGIDDSVKGYLAPLVLNR    300

BSNT_04832___    301 VLRSYADELAEARNHPLSHRRYMWKVEY    328
                     |||||||.||||||||||.|||||||||
RBAM_029670__    301 VLRSYADALAEARNHPLSQRRYMWKVEY    328


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