Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04827 and RBAM_029640

See DNA alignment / Visit BSNT_04827 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:21
# Commandline: needle
#    -asequence pep-align/BSNT_04827.1.9828.seq
#    -bsequence pep-align/RBAM_029640___yurM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04827-RBAM_029640___yurM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04827-RBAM_029640___yurM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04827
# 2: RBAM_029640___yurM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     155/294 (52.7%)
# Similarity:   161/294 (54.8%)
# Gaps:         132/294 (44.9%)
# Score: 806.0
# 
#
#=======================================

BSNT_04827         0 --------------------------------------------------      0
                                                                       
RBAM_029640__      1 MLPEKTDLRHARQAVRTGGKPRKWYVGETSVWLFLFIYLIAVAYPLLWMA     50

BSNT_04827         0 --------------------------------------------------      0
                                                                       
RBAM_029640__     51 VSAFKSSDEIFEHSWSLPSVWHPENFVSAWNQGISAYFMNSVIVTVLTCL    100

BSNT_04827         1 --------------------------------MLTPQVSLMPLYSIIQSL     18
                                                     ||||||||:|||||||||
RBAM_029640__    101 ITVFVSAWAAYGLARFQFKGKGFVLIICLGGLMLTPQVSLVPLYSIIQSL    150

BSNT_04827        19 GLYNTYWALILPYAAYRIPFTIILIRSYFLSISKELEEAAYLDGCTSFGV     68
                     |||||||||||||||||||||:|||||||||||||||||||||||||||:
RBAM_029640__    151 GLYNTYWALILPYAAYRIPFTVILIRSYFLSISKELEEAAYLDGCTSFGI    200

BSNT_04827        69 FFRIFLPMSVPILVTSGILTAYHTWNEFMFAIIFIDDENLRTIPAGLMQF    118
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_029640__    201 FFRIFLPMSVPILVTSGILTAYHTWNEFMFAIIFIDDENLRTIPAGLMQF    250

BSNT_04827       119 RDALQTDWGVLLAGLTISAAPIIILFLLMQKYFVRGIASGSVKG    162
                     |||||||||||||||||||||||.||||||:||:||||:|||||
RBAM_029640__    251 RDALQTDWGVLLAGLTISAAPIIALFLLMQRYFIRGIAAGSVKG    294


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