Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04758 and RBAM_029270

See DNA alignment / Visit BSNT_04758 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:17
# Commandline: needle
#    -asequence pep-align/BSNT_04758___yutM.1.9828.seq
#    -bsequence pep-align/RBAM_029270___yutM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04758___yutM-RBAM_029270___yutM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04758___yutM-RBAM_029270___yutM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04758___yutM
# 2: RBAM_029270___yutM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 121
# Identity:     108/121 (89.3%)
# Similarity:   113/121 (93.4%)
# Gaps:           1/121 ( 0.8%)
# Score: 578.0
# 
#
#=======================================

BSNT_04758___      1 MMSNPVTITEAAALHIKDMMKEHEEENAFLRVGVKGGGCSGLSYGMGFEH     50
                      ||.||||||||||||||||||||||||||||||||||||||||||||||
RBAM_029270__      1 -MSVPVTITEAAALHIKDMMKEHEEENAFLRVGVKGGGCSGLSYGMGFEH     49

BSNT_04758___     51 EKSESDSVFDQHGITVLVDKESLDIMNGTVIDYKQSMLGGGFTIDNPNAI    100
                     ||.|.||:|:|||||||||.||||||.||:||:||||:||||||||||||
RBAM_029270__     50 EKGEKDSMFEQHGITVLVDSESLDIMTGTIIDFKQSMMGGGFTIDNPNAI     99

BSNT_04758___    101 ASCGCGSSFRTATNAGKPEEC    121
                     ||||||||||||.|||.||||
RBAM_029270__    100 ASCGCGSSFRTAKNAGTPEEC    120


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