Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04714 and RBAM_029080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:16
# Commandline: needle
# -asequence pep-align/BSNT_04714___yuiG.1.9828.seq
# -bsequence pep-align/RBAM_029080___yuiG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04714___yuiG-RBAM_029080___yuiG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04714___yuiG-RBAM_029080___yuiG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04714___yuiG
# 2: RBAM_029080___yuiG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 151/200 (75.5%)
# Similarity: 176/200 (88.0%)
# Gaps: 3/200 ( 1.5%)
# Score: 811.0
#
#
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BSNT_04714___ 1 MKQRKLRAGDMALIGMFAALMAVGANITSVAPFLQVAGIPLSMQPFFCLL 50
||||.||||||||||||||||||||||||:||||||||||||:|||||||
RBAM_029080__ 1 MKQRNLRAGDMALIGMFAALMAVGANITSMAPFLQVAGIPLSLQPFFCLL 50
BSNT_04714___ 51 AALLLGSKRAAIAMIVYALVGLAGAPVFAQFSAGFAPFAGKSGGFIISYI 100
||:|||::||||||.||||.||||||||||||||||||.|||||||::||
RBAM_029080__ 51 AAMLLGARRAAIAMTVYALAGLAGAPVFAQFSAGFAPFIGKSGGFILAYI 100
BSNT_04714___ 101 PAAFAAGWFLERNIQPSKIRFLIASLIGTAIMYLIGTTYMYLALKLWIHT 150
||||||||.||:..:|.::.:..|||||||::|:|||||.|:|||||:|.
RBAM_029080__ 101 PAAFAAGWLLEKTKKPGRLHYAWASLIGTAVIYIIGTTYTYIALKLWLHA 150
BSNT_04714___ 151 PVSYGTAWGFMIWFMVKDTALAVILSFIAPAIYRSIHKATGFNRNHISST 200
|:|||.||.:||||.:||..||::|:.||||:||||||||||:||..
RBAM_029080__ 151 PISYGMAWFYMIWFFIKDIVLALLLASIAPAVYRSIHKATGFSRNPA--- 197
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