Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04705 and RBAM_029010

See DNA alignment / Visit BSNT_04705 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:12
# Commandline: needle
#    -asequence pep-align/BSNT_04705___dhbF.1.9828.seq
#    -bsequence pep-align/RBAM_029010___dhbF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04705___dhbF-RBAM_029010___dhbF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04705___dhbF-RBAM_029010___dhbF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04705___dhbF
# 2: RBAM_029010___dhbF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2388
# Identity:    1668/2388 (69.8%)
# Similarity:  1969/2388 (82.5%)
# Gaps:          23/2388 ( 1.0%)
# Score: 8781.0
# 
#
#=======================================

BSNT_04705___      1 MPDTKDLQYSLTGAQTGIWFAQQLDPDNPIYNTAEYIEINGPINIALFEE     50
                     |.||:  |..|||||.|||||||||||||||||.||:||||.|::.:|:.
RBAM_029010__      1 MHDTQ--QLPLTGAQAGIWFAQQLDPDNPIYNTGEYVEINGAIDVNIFKT     48

BSNT_04705___     51 ALRHVIKEAESLHVRFGENMDGPWQMINPSPDVQLHVIDVSSEPDPEKTA    100
                     ||..|:.||.|||.||.|..|||.|:|||..:|.:.|||||||..|::.|
RBAM_029010__     49 ALERVLTEAASLHARFEEGADGPKQIINPPFEVAIDVIDVSSEAVPKQAA     98

BSNT_04705___    101 LNWMKADLAKPVDLGYDPLFNEALFIAGPDRFFWYQRIHHIAIDGFGFSL    150
                     |..|:.|||:|||:...|||.:.||.|||:|||||||||||||||:||||
RBAM_029010__     99 LRLMQTDLAEPVDMAAGPLFRDILFQAGPERFFWYQRIHHIAIDGYGFSL    148

BSNT_04705___    151 IAQRVASTYTALIKGQTAKGRSFGSLQAILEEDTDYRGSEQYEKDRQFWL    200
                     :|:|.|..|||:.:|:...|||||||:.:::||.:||.|:|:.|||:||:
RBAM_029010__    149 LARRTAQMYTAIREGRPDNGRSFGSLEDLVKEDQEYRASDQFLKDREFWM    198

BSNT_04705___    201 DCFADAPEVVSLADRAPRTSNSFLRHTAYLPPSDVNALKEAARYFSGSWH    250
                     :.|||.|:|||||:||||||..|.|.||||..:.:..:|...     :||
RBAM_029010__    199 EKFADEPDVVSLAERAPRTSTRFRRSTAYLSETALQHVKAIP-----NWH    243

BSNT_04705___    251 EVMIAVSAVYVHRMTGSEDVVLGLPMMGRIGSASLNVPAMVMNLLPLRLT    300
                     |.:.|.:||||:|||.:.|:||||||||||||.|||:|:||||||||||:
RBAM_029010__    244 EAVTAAAAVYVYRMTNAGDIVLGLPMMGRIGSISLNIPSMVMNLLPLRLS    293

BSNT_04705___    301 VSSSMSFSELIQQIFREIRSIRRHHKYRHEELRRDLKLIGENHRLFGPQI    350
                     :...|:|.|.:.|:.:|||:||||.|||||::||||||:|:|.||||||:
RBAM_029010__    294 LRPDMNFHEAVSQVAKEIRNIRRHQKYRHEDMRRDLKLLGDNRRLFGPQV    343

BSNT_04705___    351 NLMPFDYGLDFAGARGTTHNLSAGPVDDLSINVYDRTDGSGLRIDVDANP    400
                     |:|||||.|||||||||.||||||||||||||||||.||||:|:|.||||
RBAM_029010__    344 NVMPFDYALDFAGARGTVHNLSAGPVDDLSINVYDRADGSGMRVDFDANP    393

BSNT_04705___    401 EVYSEPDIKLHQQRILQLLQTASAGEDMLIGQMELLLPEEKEKVISKWNE    450
                     ||||..||:.||:|.|.||::|...:...||.:.|||..|:.:|:..||:
RBAM_029010__    394 EVYSAEDIENHQKRFLLLLESAVKDQTQKIGTLNLLLESERLRVLESWND    443

BSNT_04705___    451 TAISEKLVSLQDMFEKQAVLTPERIALMCDDIQVNYRKLNEEANRLARLL    500
                     |..:||..||.::|.:|||.||:|.|::.::.:::|.:||:.||:||.:|
RBAM_029010__    444 TRKAEKQKSLPELFYEQAVKTPDRPAIITENEELSYAELNKRANQLAGML    493

BSNT_04705___    501 IEKGIGPEQFVALALPRSPEMVASMLGVLKTGAAYLPLDPEFPSDRISYM    550
                     .|||:|||||.||.||||.::..|||.|||||||||||||:|||:||:||
RBAM_029010__    494 KEKGLGPEQFAALLLPRSQDLAVSMLAVLKTGAAYLPLDPDFPSERITYM    543

BSNT_04705___    551 LEDAKPSCIITTEEIAASLPDNLAVPELVLDQAVTQEIIKRYSPENPDVS    600
                     |:||:|:|:|||.|::..:|::.....::||...|   :|..:.:|.|..
RBAM_029010__    544 LKDAQPACLITTMELSGRMPEDSDAKRIILDDPDT---VKTVAAQNADCP    590

BSNT_04705___    601 VSLD----HPAYIIYTSGSTGRPKGVVVTQKSLSNFLLSMQEAFSLGEED    646
                     ...:    |||||||||||||:|||||||.||:|||||||:|.|.|||:|
RBAM_029010__    591 AQTECSPLHPAYIIYTSGSTGKPKGVVVTLKSVSNFLLSMREMFPLGEQD    640

BSNT_04705___    647 RLLAVTTVAFDISALELYLPLISGAQIVIAKKETIREPQALAQMIENFDI    696
                     |||||||.|||||.|||:|||||||..|||:||||:||:|||.||.::.|
RBAM_029010__    641 RLLAVTTAAFDISGLELFLPLISGAGCVIARKETIQEPRALAHMIHSYGI    690

BSNT_04705___    697 NIMQATSTLWHALVTSEPEKLRGLRVLVGGEALPSGLLQALQDLHCSVTN    746
                     :|||||.||||:|||:||:.||.|:|||||||||:.|:.||.:..|:|||
RBAM_029010__    691 SIMQATPTLWHSLVTNEPDSLRALQVLVGGEALPNALMHALLESGCTVTN    740

BSNT_04705___    747 LYGPTETTIWSAAAFLEEGLQGVPPIGKPIWNTQVYVLDNGLQPVPPGVV    796
                     |||||||||||||..|.:...|.||||||||||:|||||..|||||||:.
RBAM_029010__    741 LYGPTETTIWSAAQPLAKDHTGAPPIGKPIWNTRVYVLDAALQPVPPGIA    790

BSNT_04705___    797 GELYIAGTGLARGYFHRPDLTAERFVADPYGPPGTRMYRTGDQARWRADG    846
                     |||||||.||||||::|||||||||:||||||.|.|||||||..|||.||
RBAM_029010__    791 GELYIAGEGLARGYYNRPDLTAERFIADPYGPAGARMYRTGDLVRWREDG    840

BSNT_04705___    847 SLDYIGRADHQIKIRGFRIELGEIDAVLANHPHIEQAAVVVREDQPGDKR    896
                     |||||.||||||||||||||||||::||:.:|.|.||||:||||||||||
RBAM_029010__    841 SLDYISRADHQIKIRGFRIELGEIESVLSKYPGISQAAVIVREDQPGDKR    890

BSNT_04705___    897 LAAYVVADAAIDTAELRRYMGASLPDYMVPSAFVEMDELPLTPNGKLDRK    946
                     ||||.|||..:|...||.|||.||||||||.|||:::|||||||.||||.
RBAM_029010__    891 LAAYAVADQPLDIGRLREYMGESLPDYMVPGAFVQLEELPLTPNKKLDRS    940

BSNT_04705___    947 ALPAPDFSTSVSDRAPRTPQEEILCDLFAEVLGLARVGIDDSFFELGGHS    996
                     ||||||||..:|||.||||||||||||||||||||||||||.||||||||
RBAM_029010__    941 ALPAPDFSAVLSDRGPRTPQEEILCDLFAEVLGLARVGIDDGFFELGGHS    990

BSNT_04705___    997 LLAARLMSRIREVMGAELGIAKLFDEPTVAGLAAHLDLAQSARPALQRAE   1046
                     |||.|||||:||.|||||||.:|||.||||||||.||.|:||||.|:..:
RBAM_029010__    991 LLAGRLMSRVRETMGAELGIGRLFDTPTVAGLAAQLDTAKSARPKLKPFD   1040

BSNT_04705___   1047 RPEKIPLSFAQRRLWFLHCLEGPSPTYNIPVAVRLSGELDQGLLKAALYD   1096
                     |||.|||||||.|||||:|||||||||||||.||:||:|||..||.|..|
RBAM_029010__   1041 RPEHIPLSFAQLRLWFLYCLEGPSPTYNIPVIVRMSGKLDQSALKHAFSD   1090

BSNT_04705___   1097 LVRRHESLRTIFPESQGTSYQHILDADRACPELHVTEIAEKELSDRLAEA   1146
                     :|.|||||||:|||::|:|:|.||.|:.|.|...||...:.||.|.||.|
RBAM_029010__   1091 VVSRHESLRTVFPENKGSSHQLILSAEEARPVFTVTRADKNELQDMLAAA   1140

BSNT_04705___   1147 VRYSFDLAAEPAFRAELFVIGPDEYVLLLLVHHIVGDGWSLTPLTRDLGT   1196
                     .||.||||.|||.|||||.:|..||.|::|:|||.||||||.||.|||..
RBAM_029010__   1141 ARYRFDLAKEPAVRAELFDLGDGEYTLMILLHHIAGDGWSLNPLMRDLSI   1190

BSNT_04705___   1197 AYAARCHGRSPEWAPLAVQYADYALWQQELLGNEDDPNSLIAGQLAFWKE   1246
                     ||.||..|...|||||||||||||||||:|||:..|..||||.||.|||:
RBAM_029010__   1191 AYIARQTGEKAEWAPLAVQYADYALWQQQLLGSASDSESLIARQLDFWKK   1240

BSNT_04705___   1247 TLKNLPDQLELPTDYSRPAEPSHDGDTIHFRIEPEFHKRLQELARANRVS   1296
                     ||:|:|||||||:|:.||||.|:.|..|...|..|.|.||..|||..|||
RBAM_029010__   1241 TLENVPDQLELPSDFPRPAESSYRGGVIPVNIGQELHARLLSLARNQRVS   1290

BSNT_04705___   1297 LFMVLQSGLAALLTRLGAGTDIPIGSPIAGRNDDALGDLVGLFINTLVLR   1346
                     |||||||||:|||||||||||||||||||||:|||||||||:||||||||
RBAM_029010__   1291 LFMVLQSGLSALLTRLGAGTDIPIGSPIAGRSDDALGDLVGMFINTLVLR   1340

BSNT_04705___   1347 TDTSGDPSFRELLDRVREVNLAAYDNQDLPFERLVEVLNPARSRATHPLF   1396
                     |||||||||.|||:||||:|||||::||:|||||||.|||.|||:.||||
RBAM_029010__   1341 TDTSGDPSFCELLERVREMNLAAYEHQDVPFERLVEELNPVRSRSRHPLF   1390

BSNT_04705___   1397 QIMLAFQNTPDAELHLPDMESSLRINSVGSAKFDLTLEISEDRLADGTPN   1446
                     |:|||||||||..|.|||||:||:|:||||:|||||||::|.|..||||.
RBAM_029010__   1391 QVMLAFQNTPDPVLSLPDMETSLQISSVGSSKFDLTLELAEQRHDDGTPA   1440

BSNT_04705___   1447 GMEGLLEYSTDLFKRETAQALADRLMRLLEAAESDPDEQIGNLDILAPEE   1496
                     |:|||||:|||||::|||:|||.||:.|||.|.|.|::.||:|.||:.||
RBAM_029010__   1441 GIEGLLEFSTDLFRKETAEALAGRLLLLLEDAASHPEKPIGSLTILSDEE   1490

BSNT_04705___   1497 HSSMVTDWQSVSEKIPHACLPEQFEKQAALRPDAIAVVYENQELSYAELN   1546
                     ...::...::.....|...|||.||.|||.:.|..|.|:|...|:|.|||
RBAM_029010__   1491 RRKLLPVKRAKQHIQPRQTLPELFEIQAAAKSDETAAVFEESGLTYKELN   1540

BSNT_04705___   1547 ERANRLARMMISEGVGPEQFVALALPRSLEMAVGLLAVLKAGAAYLPLDP   1596
                     |:||:||.|||:.||||||||||||||||:|.||||||||.|||||||||
RBAM_029010__   1541 EKANQLAHMMIARGVGPEQFVALALPRSLDMIVGLLAVLKTGAAYLPLDP   1590

BSNT_04705___   1597 DYPADRIAFMLKDAQPAFIMTNTKAANHIPPVENVPKIVLDDPELAEKLN   1646
                     |||||||||||.||:|.|::||.:.|:.:.....:|..:||||:..|.|.
RBAM_029010__   1591 DYPADRIAFMLHDAKPVFMLTNREGASKLSIESGMPAFILDDPQNKETLE   1640

BSNT_04705___   1647 TYPAGNPKNKDRTQPLSPLNTAYVIYTSGSTGVPKGVMIPHQNVTRLFAA   1696
                     .|...||.:.||.:|||||:.||||||||||||||||:|||.||.|||.:
RBAM_029010__   1641 RYAVKNPADADRIRPLSPLHPAYVIYTSGSTGVPKGVIIPHSNVIRLFES   1690

BSNT_04705___   1697 TEHWFRFSSDDIWTMFHSYAFDFSVWEIWGPLLHGGRLVIVPHHVSRSPE   1746
                     |.||:.|.|||:|||||||||||||||:|||||||||||:|||.:||||.
RBAM_029010__   1691 TRHWYHFHSDDVWTMFHSYAFDFSVWEMWGPLLHGGRLVVVPHDISRSPS   1740

BSNT_04705___   1747 AFLRLLVKEGVTVLNQTPSAFYQFMQAEREQPDLGQALSLRYVIFGGEAL   1796
                     |||.|||||.|||||||||||||.|.||:|..:||:.|:|||:|||||||
RBAM_029010__   1741 AFLHLLVKERVTVLNQTPSAFYQLMHAEKEHKELGRQLALRYIIFGGEAL   1790

BSNT_04705___   1797 ELSRLEDWYNRHPENRPQLINMYGITETTVHVSYIELDRSMAALRANSLI   1846
                     |||||||||:||.:|:|.|:||||||||||||||:|||:::|.|||||||
RBAM_029010__   1791 ELSRLEDWYSRHADNQPVLVNMYGITETTVHVSYLELDKNIAELRANSLI   1840

BSNT_04705___   1847 GCGIPDLGVYVLDERLQPVPPGVAGELYVSGAGLARGYLGRPGLTSERFI   1896
                     |||||||.|||||:||:|||||:.||:||:|.|:|||||||..||:|||:
RBAM_029010__   1841 GCGIPDLNVYVLDDRLEPVPPGITGEMYVAGGGVARGYLGRQSLTAERFV   1890

BSNT_04705___   1897 ADPFGPPGTRMYRTGDVARLRADGSLDYVGRADHQVKIRGFRIELGEIEA   1946
                     |||:||||||||||||:||||.||||||:||||||:||||||||||||||
RBAM_029010__   1891 ADPYGPPGTRMYRTGDLARLRTDGSLDYMGRADHQIKIRGFRIELGEIEA   1940

BSNT_04705___   1947 ALVQHPQLEDAAVIVREDQPGDKRLAAYVIPSE-ETFDTAELRRYAAERL   1995
                     .||:||.:|||||:||||:|||||||||::.|. .|.||..:||:|.|.|
RBAM_029010__   1941 VLVKHPDVEDAAVVVREDRPGDKRLAAYLVRSAGSTLDTGNMRRFAEESL   1990

BSNT_04705___   1996 PDYMVPAAFVTMKELPLTPNGKLDRKALPAPDFAAAVTGRGPRTPQEEIL   2045
                     ||||:|:|||.|.||||||||||||||||||||...||||||||||||:|
RBAM_029010__   1991 PDYMIPSAFVQMNELPLTPNGKLDRKALPAPDFQTEVTGRGPRTPQEEML   2040

BSNT_04705___   2046 CDLFMEVLHLPRVGIDDRFFDLGGHSLLAVQLMSRIREALGVELSIGNLF   2095
                     |:||.|||||||||||||||||||||||||.||||||||:|.|||||.||
RBAM_029010__   2041 CELFAEVLHLPRVGIDDRFFDLGGHSLLAVHLMSRIREAMGAELSIGTLF   2090

BSNT_04705___   2096 EAPTVAGLAERLEMGSSQSALDVLLPLRTSGDKPPLFCVHPAGGLSWCYA   2145
                     ||||||.||||||.|:..|||||||||||:|::.||||||||||||||||
RBAM_029010__   2091 EAPTVASLAERLESGTGASALDVLLPLRTAGEETPLFCVHPAGGLSWCYA   2140

BSNT_04705___   2146 GLMTNIGTDYPIYGLQARGIGQREELPKTLDDMAADYIKQIRTVQPKGPY   2195
                     |||:::..|||||||||||||::|.||::|||||||||::||||||||||
RBAM_029010__   2141 GLMSSLEADYPIYGLQARGIGKKESLPQSLDDMAADYIEKIRTVQPKGPY   2190

BSNT_04705___   2196 HLLGWSLGGNVVQAMATQLQNQGEEVSLLVMLDAYPNHFLPIKEAPDDEE   2245
                     .||||||||||:||||||||::|||||||||||||||||||||.||||||
RBAM_029010__   2191 RLLGWSLGGNVIQAMATQLQSRGEEVSLLVMLDAYPNHFLPIKNAPDDEE   2240

BSNT_04705___   2246 ALIALLALGGYDPDSLGDKPLDFEAAIEILRRDGSALASLDETVILNLKN   2295
                     |:||||||||||||||||:||||:.|:.||||:|||||||||:|::|||:
RBAM_029010__   2241 AVIALLALGGYDPDSLGDQPLDFDTALTILRREGSALASLDESVMMNLKD   2290

BSNT_04705___   2296 TYVNSVGILGSYKPKTFRGNVLFFRSTIIPEWFDPIEPDSWKPYINGQIE   2345
                     ||:||||:||:||||.|.|:|||||||||||||||||||:|||||.|:||
RBAM_029010__   2291 TYINSVGLLGTYKPKPFHGDVLFFRSTIIPEWFDPIEPDTWKPYITGKIE   2340

BSNT_04705___   2346 QIDIDCRHKDLCQPEPLAQIGKVLAVKLEELNK-----   2378
                     :.|:||||||:|||.|||.||.:||   |:||.     
RBAM_029010__   2341 RYDLDCRHKDMCQPGPLADIGAILA---EKLNGRRTVR   2375


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