Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04698 and RBAM_028990
See
DNA alignment /
Visit
BSNT_04698 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:12
# Commandline: needle
# -asequence pep-align/BSNT_04698.1.9828.seq
# -bsequence pep-align/RBAM_028990___yukJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04698-RBAM_028990___yukJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04698-RBAM_028990___yukJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04698
# 2: RBAM_028990___yukJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity: 176/225 (78.2%)
# Similarity: 197/225 (87.6%)
# Gaps: 0/225 ( 0.0%)
# Score: 975.0
#
#
#=======================================
BSNT_04698 1 MAVQQYGVLKGIVLDMKRETDDDSPHFQVKMLGEENTYYRCAINVMSSSE 50
||||.||||||.|.||:||||||||||||::|||.:|.|||||||||||:
RBAM_028990__ 1 MAVQHYGVLKGTVSDMRRETDDDSPHFQVEVLGEPDTRYRCAINVMSSSK 50
BSNT_04698 51 ESEVLYLADDQFDSGSITILPNMPYGYTRINEANREVALDYVRGNLFDPR 100
||||||.|.|.||:.:||:|||:|||||.|:|.:||:||||||..|||||
RBAM_028990__ 51 ESEVLYAARDHFDASAITLLPNIPYGYTPIDETSRELALDYVRDGLFDPR 100
BSNT_04698 101 EMKPLPHEITGPDNDLNDFIETYMKKAQDEKAPVYIFGSKFGPEQAADKI 150
.|.|||||:|||||||||||||||:||:.|||.|||:|||||||..||||
RBAM_028990__ 101 NMVPLPHEVTGPDNDLNDFIETYMQKAKSEKATVYIYGSKFGPEPGADKI 150
BSNT_04698 151 FGFTPTNGMHNIHMNQGNAMDTRWKKDNGSWHDGGILIQFADQWAAVFLA 200
|||.||||||||||||||.:|||||||||:||||||||||||||||||||
RBAM_028990__ 151 FGFKPTNGMHNIHMNQGNPIDTRWKKDNGTWHDGGILIQFADQWAAVFLA 200
BSNT_04698 201 FLSQSWCNDENGNPVRDCDHTQTSA 225
|||||||.:|.|:|...|||||.:.
RBAM_028990__ 201 FLSQSWCTNEEGHPYTFCDHTQLNG 225
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.