Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04677 and RBAM_028870

See DNA alignment / Visit BSNT_04677 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:09
# Commandline: needle
#    -asequence pep-align/BSNT_04677___yueG.1.9828.seq
#    -bsequence pep-align/RBAM_028870___yueG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04677___yueG-RBAM_028870___yueG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04677___yueG-RBAM_028870___yueG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04677___yueG
# 2: RBAM_028870___yueG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 73
# Identity:      52/73 (71.2%)
# Similarity:    60/73 (82.2%)
# Gaps:           0/73 ( 0.0%)
# Score: 268.0
# 
#
#=======================================

BSNT_04677___      1 MPAIVGPIYIMSVTGNAAASFGDIFAISPKSVAHSGAGSGAFQLGDFVKI     50
                     ||||||||||||:.|:|||||||:||||||:|.|||||:|||..|||||:
RBAM_028870__      1 MPAIVGPIYIMSLAGDAAASFGDVFAISPKAVDHSGAGAGAFHSGDFVKV     50

BSNT_04677___     51 NNQTSKTLFEDADITDETVSFNG     73
                     .|:.|||.|||.|:.||...||.
RBAM_028870__     51 TNKFSKTRFEDIDVFDEPDWFNA     73


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