Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04660 and RBAM_028750

See DNA alignment / Visit BSNT_04660 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:08
# Commandline: needle
#    -asequence pep-align/BSNT_04660___yuxO.1.9828.seq
#    -bsequence pep-align/RBAM_028750___yuxO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04660___yuxO-RBAM_028750___yuxO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04660___yuxO-RBAM_028750___yuxO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04660___yuxO
# 2: RBAM_028750___yuxO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:     101/128 (78.9%)
# Similarity:   109/128 (85.2%)
# Gaps:           2/128 ( 1.6%)
# Score: 503.0
# 
#
#=======================================

BSNT_04660___      1 MMDTKHTLLEALGIEIVENTAERCVAVMPVDHRTVQPFGYLHGGASVALA     50
                      |:..:|||.||||||.|||.||||||||||.||||||||||||||.|||
RBAM_028750__      1 -MNLNNTLLGALGIEITENTPERCVAVMPVDKRTVQPFGYLHGGASAALA     49

BSNT_04660___     51 ETAASAGAQNLIDHSTQACVGLEINANHLKSVKE-GTVKAIAEPVHIGRT     99
                     ||.||.|||:.||.|.|||||||||||||||||| |||.|||:|||.||.
RBAM_028750__     50 ETVASVGAQHFIDRSNQACVGLEINANHLKSVKEGGTVTAIAKPVHTGRA     99

BSNT_04660___    100 TIVYHIHIYDEQERLICISRCTLAVIKK    127
                     ||||.|:|:||:|||||:||||||||.|
RBAM_028750__    100 TIVYEINIFDERERLICVSRCTLAVITK    127


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