Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04627 and RBAM_028510

See DNA alignment / Visit BSNT_04627 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:04
# Commandline: needle
#    -asequence pep-align/BSNT_04627___alaR.1.9828.seq
#    -bsequence pep-align/RBAM_028510___alaR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04627___alaR-RBAM_028510___alaR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04627___alaR-RBAM_028510___alaR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04627___alaR
# 2: RBAM_028510___alaR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 166
# Identity:     151/166 (91.0%)
# Similarity:   158/166 (95.2%)
# Gaps:           0/166 ( 0.0%)
# Score: 756.0
# 
#
#=======================================

BSNT_04627___      1 MKLTEKETEILEILDENSRADLETIAKMAGIPVNEVKTIIDKLEKEKVII     50
                     |||||||||||||||||||.|.|||||||.||..|||:||:|||||||||
RBAM_028510__      1 MKLTEKETEILEILDENSRVDAETIAKMANIPAEEVKSIIEKLEKEKVII     50

BSNT_04627___     51 DYSAMIDWRKVDGHEGVTAMIDVKVTPKRGVGFDEVAERIYRFQEVESVY    100
                     ||:||||||||||.|||||||||||||||.||||||||||||||||||||
RBAM_028510__     51 DYAAMIDWRKVDGLEGVTAMIDVKVTPKRNVGFDEVAERIYRFQEVESVY    100

BSNT_04627___    101 LMSGVYDLSVVIRGNSMSDVARFVSDKLSTLDSVVSTTTHFILKKYKHDG    150
                     |||||||||||||||:|||||.|||:|||||:||||||||||||||||||
RBAM_028510__    101 LMSGVYDLSVVIRGNTMSDVASFVSEKLSTLESVVSTTTHFILKKYKHDG    150

BSNT_04627___    151 KVFETGDDDKRIVVSP    166
                     ||||:|||||||||||
RBAM_028510__    151 KVFESGDDDKRIVVSP    166


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