Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04626 and RBAM_028500
See
DNA alignment /
Visit
BSNT_04626 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:04
# Commandline: needle
# -asequence pep-align/BSNT_04626___alaT.1.9828.seq
# -bsequence pep-align/RBAM_028500___alaT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04626___alaT-RBAM_028500___alaT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04626___alaT-RBAM_028500___alaT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04626___alaT
# 2: RBAM_028500___alaT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 386
# Identity: 313/386 (81.1%)
# Similarity: 350/386 (90.7%)
# Gaps: 8/386 ( 2.1%)
# Score: 1640.0
#
#
#=======================================
BSNT_04626___ 1 MTSYLSDYVQQIKPSGIRKFFDLAATMEGVISLGVGEPDFVTAWNVREAS 50
:|||||||||||||||||||||||||||||||||||||||||
RBAM_028500__ 1 --------MQQIKPSGIRKFFDLAATMEGVISLGVGEPDFVTAWNVREAS 42
BSNT_04626___ 51 ILSLEQGYTSYTANAGLYSLREEISRYLSNRFDLSYSPDNELIVTVGASQ 100
|||||||||:||||||||.||||||.||..||.||||||:||||||||||
RBAM_028500__ 43 ILSLEQGYTAYTANAGLYELREEISSYLDQRFGLSYSPDSELIVTVGASQ 92
BSNT_04626___ 101 ALDIAIRAIVNPGEEVIIPEPCFVAYDALVSLAGGIPVHVHTTADKGFKA 150
|||:|:|||:|||||::|||||||||::||:|.|..||.:.|.|.|||||
RBAM_028500__ 93 ALDLAVRAIMNPGEEMLIPEPCFVAYESLVTLTGAKPVPIQTVAAKGFKA 142
BSNT_04626___ 151 TAADFEAAVTEKTKAILICSPSNPTGSVYSKEELNEIAEFAKKHDVIVLA 200
:.||||||:|:||||:|:||||||||||||||||..||.||:|||:||||
RBAM_028500__ 143 SPADFEAALTDKTKALLLCSPSNPTGSVYSKEELESIAAFAEKHDLIVLA 192
BSNT_04626___ 201 DEIYAELTYDEEFTSIAALPGMKERTVVISGFSKAFAMTGWRLGFAAAPS 250
|||||||||||.|||:.|:.|||||||:|||||||||||||||||.|||.
RBAM_028500__ 193 DEIYAELTYDEPFTSMGAIRGMKERTVLISGFSKAFAMTGWRLGFTAAPP 242
BSNT_04626___ 251 LLRDAMLKIHQYAMMCAPAMAQFAALEGLKNGMEDVEKMKKSYRRRRNLF 300
::|||||||||:||||||:|||:|||||||||.||||:|||||||||||.
RBAM_028500__ 243 VIRDAMLKIHQHAMMCAPSMAQYAALEGLKNGQEDVERMKKSYRRRRNLI 292
BSNT_04626___ 301 VESLNEIGLSCHHPGGAFYAFPSIKSTGMSSEQFAEELLTQEKVAVVPGS 350
||:||||||.||||||||||||||:|||||||:|||:||.:||||||||:
RBAM_028500__ 293 VETLNEIGLGCHHPGGAFYAFPSIQSTGMSSEEFAEQLLIEEKVAVVPGN 342
BSNT_04626___ 351 VFGPSGEGYIRCSYATSIEQLQEALVRMKRFLHKTT 386
||||||||||||||||||||:||||||:|||:.|..
RBAM_028500__ 343 VFGPSGEGYIRCSYATSIEQIQEALVRIKRFVEKGA 378
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.