Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04599 and RBAM_028320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:02
# Commandline: needle
# -asequence pep-align/BSNT_04599___mcpB.1.9828.seq
# -bsequence pep-align/RBAM_028320___mcpB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04599___mcpB-RBAM_028320___mcpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04599___mcpB-RBAM_028320___mcpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04599___mcpB
# 2: RBAM_028320___mcpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 662
# Identity: 497/662 (75.1%)
# Similarity: 577/662 (87.2%)
# Gaps: 1/662 ( 0.2%)
# Score: 2467.0
#
#
#=======================================
BSNT_04599___ 1 MKTFINWLKKPSISKKLIVSFIAILIIPILILEFSSYRSASGKLDQEIMG 50
||.||||..|.|||:|||:|||.|||||||:||||||.:||..||.:|.|
RBAM_028320__ 1 MKKFINWCTKASISRKLIISFIVILIIPILVLEFSSYHTASNSLDDQISG 50
BSNT_04599___ 51 NAKNSVDTFNTTVTNDLGEKAKAVTFFSESLKRSAFKGKSNQEEIKAKFS 100
||||::::||||:|||:|.||||:.||||:||.|:| .|.|...::.||.
RBAM_028320__ 51 NAKNNIESFNTTITNDIGAKAKAIEFFSETLKGSSF-SKKNISALEEKFG 99
BSNT_04599___ 101 QYVSINQGVARIYGGADNGTYVQAPKEKLPDGYDPRQRPWYQDAMKAGGE 150
||.||::.|||||||.::|.|.|||||..|..||||.|.||:||:||||.
RBAM_028320__ 100 QYTSIHKDVARIYGGTEDGGYAQAPKENTPADYDPRTRTWYKDAVKAGGT 149
BSNT_04599___ 151 IVVTDPYVAASDGSMVITIAQELKDGSGVVAMDITIDKLLEQMKQIKVGK 200
:||||||.||||||||:|:|::::||:||||||||||:||:||:.||:|:
RBAM_028320__ 150 LVVTDPYTAASDGSMVVTVAKQMQDGTGVVAMDITIDQLLKQMQGIKIGQ 199
BSNT_04599___ 201 EGYAFIATKNKTYVAHKNHKAGEKLSGDWVAKMYANDSGELQYTLNNEDK 250
:|:.||.:|||||||||:||.|:|:|..|:.::|:.|||.:.|||::::|
RBAM_028320__ 200 KGFVFITSKNKTYVAHKDHKPGDKVSTPWLNEVYSKDSGIISYTLDDQNK 249
BSNT_04599___ 251 KMTYTTNELTGWKIAGTMYMDEIKDASKSVLTTGMIVLIASIVAGGILIL 300
||.:|||:||||||.|:|.::||||||:.|||.|||||.|||:.||||||
RBAM_028320__ 250 KMAFTTNKLTGWKIEGSMELNEIKDASQPVLTMGMIVLAASIIIGGILIL 299
BSNT_04599___ 301 FIVRSITKPLKRLVQSSKTISRGDLTETIEIHSKDELGELGESFNEMGQS 350
.||||||.||||||:|||.||.|||||||:|.|||||||||.||||||:|
RBAM_028320__ 300 LIVRSITSPLKRLVRSSKQISGGDLTETIDIRSKDELGELGASFNEMGES 349
BSNT_04599___ 351 LRSLISAIQDSVNNVAASSEQLTASAGQTSKATEHITMAIEQFSNGNEEQ 400
||.||||||:||:|||||||:|||||.|||||||||||||||||||||||
RBAM_028320__ 350 LRGLISAIQNSVDNVAASSEELTASASQTSKATEHITMAIEQFSNGNEEQ 399
BSNT_04599___ 401 SEKVESSSHQLNLMNEGLQQVSQTSSDITKASIQSTEIAGTGEKFVQQTV 450
||||:|||.:||.:|:||..||:|||.||:||.||.|.|||||::|||||
RBAM_028320__ 400 SEKVDSSSVKLNHINDGLAAVSRTSSSITEASKQSKEAAGTGEEYVQQTV 449
BSNT_04599___ 451 GQMNSINQSVQQAEAVVKGLEGKSKDITSILRVINGIADQTNLLALNAAI 500
||||.||||||||||||||||.||||||.|||||||||||||||||||||
RBAM_028320__ 450 GQMNLINQSVQQAEAVVKGLEAKSKDITHILRVINGIADQTNLLALNAAI 499
BSNT_04599___ 501 EAARAGESGRGFSVVAEEVRKLAVQSADSAKEIEKLIQEIVAEIETSLHM 550
|||||||.|||||||||||||||||||.||||||||||||.|||.|||||
RBAM_028320__ 500 EAARAGEYGRGFSVVAEEVRKLAVQSAGSAKEIEKLIQEITAEINTSLHM 549
BSNT_04599___ 551 FKEVNQEVQSGLVVTDNTKESFQSIFSMTNEIAGKLQTMNSTVEQLSDRS 600
|..||:||||||.|||.||||||:||.|||:||.|||:||.|||||||.|
RBAM_028320__ 550 FTSVNEEVQSGLAVTDRTKESFQNIFGMTNDIAEKLQSMNGTVEQLSDSS 599
BSNT_04599___ 601 QHVSAAVSGIADVSKESSASIQDIAASAEEQLASMEEISSSATTLAQMAE 650
|||||||:.|||||:||:|||||||||||||||||||||:||.|||||||
RBAM_028320__ 600 QHVSAAVTDIADVSRESAASIQDIAASAEEQLASMEEISTSADTLAQMAE 649
BSNT_04599___ 651 ELRDLTKQFKIE 662
|||:|||||||.
RBAM_028320__ 650 ELRELTKQFKIN 661
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