Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04583 and RBAM_028270

See DNA alignment / Visit BSNT_04583 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:02
# Commandline: needle
#    -asequence pep-align/BSNT_04583___yulF.1.9828.seq
#    -bsequence pep-align/RBAM_028270___yulF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04583___yulF-RBAM_028270___yulF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04583___yulF-RBAM_028270___yulF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04583___yulF
# 2: RBAM_028270___yulF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 328
# Identity:     253/328 (77.1%)
# Similarity:   286/328 (87.2%)
# Gaps:           0/328 ( 0.0%)
# Score: 1339.0
# 
#
#=======================================

BSNT_04583___      1 MIRFAIIGTNWITDRFLESAADIEDFQLTAVYSRSAERAGEFAAKHNAAH     50
                     |||||.:||||||:||||:|:.|:||||||||||:.|||.|||.||.|||
RBAM_028270__      1 MIRFATVGTNWITERFLEAASAIDDFQLTAVYSRTEERAAEFAGKHGAAH     50

BSNT_04583___     51 AFSDLQEMAASDCFDAVYIASPNALHKEQAVLFMNHGKHVLCEKPFASNT    100
                     .|:.|:|||.|..:||||:|||||.|||||||||.||||||||||||||.
RBAM_028270__     51 YFTSLKEMAESKAYDAVYLASPNAFHKEQAVLFMEHGKHVLCEKPFASNA    100

BSNT_04583___    101 KETEEMISAAKANGVVLMEAMKTTFLPNFKELKKHLHKIGTVRRFTASYC    150
                     :||:|||.|||.|||:|||||||||||||..|:.||||||.|||||||||
RBAM_028270__    101 RETDEMIHAAKTNGVLLMEAMKTTFLPNFSMLQNHLHKIGPVRRFTASYC    150

BSNT_04583___    151 QYSSRYDAFRSGTVLNAFQPELSNGSLMDIGVYCIYPAVVLFGAPKDVKA    200
                     ||||||||:::|||||||.||||||||||||||||||||||||.||:|.|
RBAM_028270__    151 QYSSRYDAYKNGTVLNAFNPELSNGSLMDIGVYCIYPAVVLFGKPKNVIA    200

BSNT_04583___    201 NGYALSSGVDGEGTVILSYDGFEAVLMHSKISTSYAPAEIQGEDGTIVID    250
                     .|:.|.||||||||||||||||||||||||||.|:|||||||||||||:|
RBAM_028270__    201 TGHKLVSGVDGEGTVILSYDGFEAVLMHSKISNSFAPAEIQGEDGTIVLD    250

BSNT_04583___    251 TIHRPERVEIRYRDGRLENIAIPDPKPAMFYEAEEFVTLIKENKLESEEN    300
                     :||.|||.||||||||.|:|::||.||:|:||..||:.|::..:.||.||
RBAM_028270__    251 SIHGPERAEIRYRDGRTEDISVPDLKPSMYYETAEFINLLRNGQRESSEN    300

BSNT_04583___    301 TFERSLTTAKIMEEARKQMGIVYPADQA    328
                     |||||..||.||||||||:|||:||||.
RBAM_028270__    301 TFERSFITASIMEEARKQIGIVFPADQN    328


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