Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04575 and RBAM_028200

See DNA alignment / Visit BSNT_04575 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:01
# Commandline: needle
#    -asequence pep-align/BSNT_04575___yubE.1.9828.seq
#    -bsequence pep-align/RBAM_028200___yubE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04575___yubE-RBAM_028200___yubE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04575___yubE-RBAM_028200___yubE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04575___yubE
# 2: RBAM_028200___yubE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity:     193/283 (68.2%)
# Similarity:   228/283 (80.6%)
# Gaps:           3/283 ( 1.1%)
# Score: 1014.0
# 
#
#=======================================

BSNT_04575___      1 MARKKLKKRKLLISLFFLVSIPLALFVLATTLSKPIEI-SKETEEIDEQQ     49
                       .||..|.|..:...|.||:...||:::...||.|.. .|..||:||||
RBAM_028200__      1 --MKKKAKTKRGLGCLFAVSLIFGLFLVSMVFSKFIVTEEKPPEEVDEQQ     48

BSNT_04575___     50 VFIDSLSGHAQILYEKYHVLPSITIAQAILESDWGNSELAAKANNLFGVK     99
                     ||||||||||||||||||||||||:|||||||||||||||.||.||||||
RBAM_028200__     49 VFIDSLSGHAQILYEKYHVLPSITLAQAILESDWGNSELAGKARNLFGVK     98

BSNT_04575___    100 GNYKGHHVTMETDEVEKGKRKTIRAKFRKYSTFFESMDDHAQLFVRGTSW    149
                     |:|||.||||:|||.||||||||||||||||||||||||||:|||.||||
RBAM_028200__     99 GDYKGKHVTMKTDEFEKGKRKTIRAKFRKYSTFFESMDDHAKLFVNGTSW    148

BSNT_04575___    150 NKKKYKPVLEAGNYKEAATALQTSGYATDPDYADKISAIVEKYDLDEYDE    199
                     ||||||||:||.|||.||.|||.|||||||.||:||..::|.|:|:|||:
RBAM_028200__    149 NKKKYKPVIEADNYKTAAAALQKSGYATDPGYAEKIKDVIETYNLNEYDK    198

BSNT_04575___    200 VNPSLKSVDLNASIKDSAVQDVWSKPSTDDRSIRLTSAQSYVGKDIKVVS    249
                     :|.|||:||:..:|||.|::|||||||.:..||:|.|||.:.|:.|||||
RBAM_028200__    199 INASLKAVDMKGAIKDHAIEDVWSKPSKERHSIKLASAQKFTGQHIKVVS    248

BSNT_04575___    250 KKQKGQSVWYQFQINDKLIGWIDDSAVEIKEAT    282
                     :||.|:|||||.|:.|:||||:|.:||::.|.|
RBAM_028200__    249 EKQNGESVWYQIQVKDELIGWVDQTAVQLSEET    281


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