Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04463 and RBAM_027670

See DNA alignment / Visit BSNT_04463 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:58
# Commandline: needle
#    -asequence pep-align/BSNT_04463___ytkA.1.9828.seq
#    -bsequence pep-align/RBAM_027670___ytkA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04463___ytkA-RBAM_027670___ytkA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04463___ytkA-RBAM_027670___ytkA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04463___ytkA
# 2: RBAM_027670___ytkA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 147
# Identity:      85/147 (57.8%)
# Similarity:   106/147 (72.1%)
# Gaps:           2/147 ( 1.4%)
# Score: 428.0
# 
#
#=======================================

BSNT_04463___      1 MKK-MLVVLLFSAFLLNGCGSGESKANTAETPEVLDVKLTGPEKVNPGES     49
                     ||: :|..:....|||:.||....|.:..|.|:.|:|||||||...|.|.
RBAM_027670__      1 MKRAVLAGMCGMLFLLSSCGGNSDKTSADEEPKALEVKLTGPETAAPHEK     50

BSNT_04463___     50 AAYEAAVSYGDEAVTDADEVEFEVWKEGEKDASQMFKAKQEKGVYRLETT     99
                     |.|:|.|.||.:.|||||||.|||||||:|.:|:..|||:|||.|.|.|.
RBAM_027670__     51 AEYKAEVFYGGKRVTDADEVMFEVWKEGKKGSSKTSKAKEEKGAYHLRTE    100

BSNT_04463___    100 FKEDGVYTVQSHVTAKKQHSMPTLKVQVGDADAASNQS-EEEHSHHH    145
                     |.|:||||||||||||:||:|||:||:||||:||.:.| .||.:|||
RBAM_027670__    101 FDEEGVYTVQSHVTAKQQHNMPTVKVRVGDAEAADDSSGHEEQTHHH    147


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