Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04382 and RBAM_027170

See DNA alignment / Visit BSNT_04382 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:51
# Commandline: needle
#    -asequence pep-align/BSNT_04382___yteV.1.9828.seq
#    -bsequence pep-align/RBAM_027170___yteV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04382___yteV-RBAM_027170___yteV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04382___yteV-RBAM_027170___yteV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04382___yteV
# 2: RBAM_027170___yteV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 60
# Identity:      53/60 (88.3%)
# Similarity:    60/60 (100.0%)
# Gaps:           0/60 ( 0.0%)
# Score: 291.0
# 
#
#=======================================

BSNT_04382___      1 MLKVAVFDEEHEKDLQTEINSFLKGISEEQLIDIKYTVSAACDPDGEQLY     50
                     |||:||||||||||||||:|:||||||:|||:||||||:|||||:|||||
RBAM_027170__      1 MLKIAVFDEEHEKDLQTEVNTFLKGISDEQLVDIKYTVAAACDPEGEQLY     50

BSNT_04382___     51 CFSALILYRK     60
                     ||||||||||
RBAM_027170__     51 CFSALILYRK     60


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