Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04375 and RBAM_027130
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:51
# Commandline: needle
# -asequence pep-align/BSNT_04375.1.9828.seq
# -bsequence pep-align/RBAM_027130___ytzF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04375-RBAM_027130___ytzF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04375-RBAM_027130___ytzF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04375
# 2: RBAM_027130___ytzF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity: 195/239 (81.6%)
# Similarity: 207/239 (86.6%)
# Gaps: 0/239 ( 0.0%)
# Score: 994.0
#
#
#=======================================
BSNT_04375 1 MRLDKLLANSGYGSRKEVKAVVKAGAVMIDGKPAKDVKAHVDPDTQEVTV 50
|||||||||||:||||:||.:||||||||||:||||||.||||:.|::||
RBAM_027130__ 1 MRLDKLLANSGFGSRKDVKKIVKAGAVMIDGEPAKDVKTHVDPEKQDITV 50
BSNT_04375 51 YGEPVDYREFIYLMMNKPQGVLSATEDSRQQTVVDLLTPEEMRFEPFPAG 100
||||.|||||||:||||||||||||||||||||||||||||.||||||||
RBAM_027130__ 51 YGEPADYREFIYVMMNKPQGVLSATEDSRQQTVVDLLTPEEQRFEPFPAG 100
BSNT_04375 101 RLDKDTEGFLLLTNDGQLAHRLLSPKKHVPKTYEVHLKSQISREDISDLE 150
|||||||||||||||||||||||||||||||||||.|.|.:|.|||..||
RBAM_027130__ 101 RLDKDTEGFLLLTNDGQLAHRLLSPKKHVPKTYEVRLTSPLSPEDIVHLE 150
BSNT_04375 151 TGVYIEGGYKTKPARAEIKTNDSGNTVIYLTITEGKYHQVKQMAKAVGNE 200
.||.||||||||||..||.|.....|||:||||||||||||.||||||||
RBAM_027130__ 151 RGVVIEGGYKTKPAAVEIITESPDETVIHLTITEGKYHQVKLMAKAVGNE 200
BSNT_04375 201 VVYLKRLSMGRVSLDPALAPGEYRELTEEELHLLNEPQA 239
|.||||||||.|||||.|.|||:||||||||..|...:.
RBAM_027130__ 201 VAYLKRLSMGAVSLDPDLKPGEFRELTEEELETLRGAEV 239
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