Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04327 and RBAM_026830
See
DNA alignment /
Visit
BSNT_04327 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:47
# Commandline: needle
# -asequence pep-align/BSNT_04327___acuC.1.9828.seq
# -bsequence pep-align/RBAM_026830___acuC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04327___acuC-RBAM_026830___acuC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04327___acuC-RBAM_026830___acuC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04327___acuC
# 2: RBAM_026830___acuC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 397
# Identity: 324/397 (81.6%)
# Similarity: 357/397 (89.9%)
# Gaps: 10/397 ( 2.5%)
# Score: 1782.0
#
#
#=======================================
BSNT_04327___ 1 MAVRAKGSAMRDSVFIYSPSYQTYMFHQEHPFNQQRVLLTYDLLKTINAF 50
||||||:||||||||.|||||||||:|||||||||:..:||
RBAM_026830__ 1 ---------MRDSVFVYSPSYQTYQFHQEHPFNQRRVLLTYDLLQAADAF 41
BSNT_04327___ 51 DDGDIVTPRLASEEELSLVHTDDYIQAVKLAGAGKLPAEEGESYGLGTED 100
|:|||||||.|::|||:||||:||||||:|||||:|||.|||||||||||
RBAM_026830__ 42 DEGDIVTPRAAAKEELALVHTEDYIQAVELAGAGRLPAAEGESYGLGTED 91
BSNT_04327___ 101 TPVFAGMHEAASLLVGGTLTAADWVMSGQALHAANLGGGLHHGFRGRASG 150
|||||||||||||||||||||||:||:|||.||.||||||||||||||||
RBAM_026830__ 92 TPVFAGMHEAASLLVGGTLTAADYVMTGQARHACNLGGGLHHGFRGRASG 141
BSNT_04327___ 151 FCIYNDSAVAIQYIQKKYRSRVLYIDTDAHHGDGVQFTFYDNPDVCTLSI 200
||||||||||||||||.|.::||||||||||||||||||||..||||:|.
RBAM_026830__ 142 FCIYNDSAVAIQYIQKNYGAKVLYIDTDAHHGDGVQFTFYDRSDVCTVSF 191
BSNT_04327___ 201 HETGRYLFPGTGQIQEKGSGKGYGYSFNIPLDAFTEDDSFLEAYRTAASE 250
|||||||||||||:.|||||:||||||||||||||||||||.||.|||||
RBAM_026830__ 192 HETGRYLFPGTGQVLEKGSGQGYGYSFNIPLDAFTEDDSFLHAYNTAASE 241
BSNT_04327___ 251 VAAYFKPDVIISQNGADAHYYDPLTHLSATINIYEEIPRLAHTLAHQYCG 300
:||:||||||::||||||||||||||||.||:||:|||||||:||||||.
RBAM_026830__ 242 IAAFFKPDVILTQNGADAHYYDPLTHLSNTISIYQEIPRLAHSLAHQYCS 291
BSNT_04327___ 301 GKWIAVGGGGYDIWRVVPRAWARIWLEMKGIDPGHEIPPEWIAKWQKQCP 350
|:|||||||||||||||||||:||||||||||||..||.:||.||||..|
RBAM_026830__ 292 GRWIAVGGGGYDIWRVVPRAWSRIWLEMKGIDPGERIPQKWIDKWQKHSP 341
BSNT_04327___ 351 VALPSSWSDPADLYPPIPRKPEITEKNAQTVSKALYAIRSEQQ-RTK 396
..||:.||||..||||||||.||:|||||||.|||:||||||: :||
RBAM_026830__ 342 CTLPAFWSDPEQLYPPIPRKEEISEKNAQTVEKALFAIRSEQRYKTK 388
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.