Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04269 and RBAM_026280
See
DNA alignment /
Visit
BSNT_04269 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence pep-align/BSNT_04269___dnaE.1.9828.seq
# -bsequence pep-align/RBAM_026280___dnaE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04269___dnaE-RBAM_026280___dnaE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04269___dnaE-RBAM_026280___dnaE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04269___dnaE
# 2: RBAM_026280___dnaE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1118
# Identity: 886/1118 (79.2%)
# Similarity: 998/1118 (89.3%)
# Gaps: 6/1118 ( 0.5%)
# Score: 4594.0
#
#
#=======================================
BSNT_04269___ 1 ---MSFVHLQVHSGYSLLNSAAAVEELVSEADRLGYASLALTDDHVMYGA 47
:||||||||||||||||||:|:|||::|..|||:||||||::|||||
RBAM_026280__ 1 MAALSFVHLQVHSGYSLLNSAASVKELVTQAKELGYSSLALTDENVMYGA 50
BSNT_04269___ 48 IQFYKACKARGINPIIGLTASVFTDDSELEAYPLVLLAKSNTGYQNLLKI 97
|:||||||:.||.||||||||::|||:||||:||:|||::|||||||:||
RBAM_026280__ 51 IEFYKACKSNGIKPIIGLTASIYTDDTELEAHPLILLAETNTGYQNLVKI 100
BSNT_04269___ 98 SSVLQSKSKGGLKPKWLHSYREGIIAITPGEKGYIETLLEGGLFEQAAQA 147
||.|||.:|||:|.||:.||.||:|||||||.||||:||:.|.||:|.:|
RBAM_026280__ 101 SSALQSMAKGGMKRKWMKSYHEGLIAITPGENGYIESLLQTGKFEEAVRA 150
BSNT_04269___ 148 SLEFQSIFGKGAFYFSYQPFKGNQVLSEQILKLSEETGIPVTATGDVHYI 197
:..|:.:||.|.||..||||||::.|||:||:||.||.|.|.|.|||.||
RBAM_026280__ 151 AEGFRELFGDGRFYLGYQPFKGHETLSEEILRLSAETEIAVCAAGDVRYI 200
BSNT_04269___ 198 RKEDKAAYRCLKAIKAGEKLTDAPAEDLPDLDLKPLEEMQNIYREHPEAL 247
:|||:.|||||.|||||||..| .:.:||||.|:..|||..:|..||||:
RBAM_026280__ 201 KKEDQDAYRCLCAIKAGEKWED-QSGNLPDLYLRAPEEMAELYTRHPEAI 249
BSNT_04269___ 248 QASVEIAEQCRVDVSLGQTRLPSFPTPDGTSADDYLTDICMEGLRSRFGK 297
:|:..||.|||||||||||:|||||.|||.||||||.:||.||||.|||.
RBAM_026280__ 250 EAAARIARQCRVDVSLGQTQLPSFPAPDGKSADDYLAEICHEGLRLRFGT 299
BSNT_04269___ 298 PDERYLRRLQYELDVIKRMKFSDYFLIVWDFMKHAHEKGIVTGPGRGSAA 347
||||.:|||:||||||:||||||||||||||||:||||||||||||||||
RBAM_026280__ 300 PDERAVRRLEYELDVIRRMKFSDYFLIVWDFMKYAHEKGIVTGPGRGSAA 349
BSNT_04269___ 348 GSLVAYVLYITDVDPIKHHLLFERFLNPERVSMPDIDIDFPDTRRDEVIQ 397
||||||.|:||||||:||.|||||||||||:|||||||||||||||||||
RBAM_026280__ 350 GSLVAYSLFITDVDPLKHSLLFERFLNPERISMPDIDIDFPDTRRDEVIQ 399
BSNT_04269___ 398 YVQQKYGAMHVAQIITFGTLAAKAALRDVGRVFGVSPKEADQLAKLIPSR 447
|||.||||||||||||||||||||||||.|||||:|||||||||:||||:
RBAM_026280__ 400 YVQNKYGAMHVAQIITFGTLAAKAALRDTGRVFGISPKEADQLARLIPSK 449
BSNT_04269___ 448 PGMTLDEARQQSPQLDKRLRESSLLQQVYSIARKIEGLPRHASTHAAGVV 497
|||||:|||:||.||::||.||::|.:|:.|||||||||||.||||||||
RBAM_026280__ 450 PGMTLEEARRQSAQLNRRLSESAVLHKVFQIARKIEGLPRHTSTHAAGVV 499
BSNT_04269___ 498 LSEEPLTDVVPLQEGHEGIYLTQYAMDHLEDLGLLKMDFLGLRNLTLIES 547
||:|||::||||||||:|:|||||||||||||||||||||||||||||||
RBAM_026280__ 500 LSKEPLSEVVPLQEGHDGVYLTQYAMDHLEDLGLLKMDFLGLRNLTLIES 549
BSNT_04269___ 548 ITSMIEKEENIKIDLSSISYSDDKTFSLLSKGDTTGIFQLESAGMRSVLK 597
|.:|||||.|.|||.|.|||.|:|||||||.|||||||||||:|||:|||
RBAM_026280__ 550 IKTMIEKETNTKIDFSEISYQDEKTFSLLSNGDTTGIFQLESSGMRNVLK 599
BSNT_04269___ 598 RLKPSGLEDIVAVNALYRPGPMENIPLFIDRKHGRAPVHYPHEDLRSILE 647
|||||.||||||||||||||||||||||||||||||.|..||||:|:||.
RBAM_026280__ 600 RLKPSRLEDIVAVNALYRPGPMENIPLFIDRKHGRARVEVPHEDVRNILS 649
BSNT_04269___ 648 DTYGVIVYQEQIMMIASRMAGFSLGEADLLRRAVSKKKKEILDRERSHFV 697
|||||||||||||||||||||||||||||||||||||:|:||||||||||
RBAM_026280__ 650 DTYGVIVYQEQIMMIASRMAGFSLGEADLLRRAVSKKQKDILDRERSHFV 699
BSNT_04269___ 698 EGCLKKEYSVDTANEVYDLIVKFANYGFNRSHAVAYSMIGCQLAYLKAHY 747
||||||||||.|||||||||||||||||||||||||||||.|||||||||
RBAM_026280__ 700 EGCLKKEYSVVTANEVYDLIVKFANYGFNRSHAVAYSMIGYQLAYLKAHY 749
BSNT_04269___ 748 PLYFMCGLLTSVIGNEDKISQYLYEAKGSGIRILPPSVNKSSFPFTVENG 797
|||||||||||||||||||||||:|||||||::||||:|||.|||..|||
RBAM_026280__ 750 PLYFMCGLLTSVIGNEDKISQYLHEAKGSGIQVLPPSINKSGFPFAPENG 799
BSNT_04269___ 798 SVRYSLRAIKSVGVSAVKDIYKARKEKPFEDLFDFCFRVPSKSVNRKMLE 847
:|||||||:|:|||||||||||||..||||||||||||||:||||||.:|
RBAM_026280__ 800 AVRYSLRAVKNVGVSAVKDIYKARTHKPFEDLFDFCFRVPAKSVNRKTIE 849
BSNT_04269___ 848 ALIFSGAMDEFGQNRATLLASIDVALEHAELFAADDDQMGLFLDESFSIK 897
|||||||||||.||||.||||:||||||||||.||||||||||:||||||
RBAM_026280__ 850 ALIFSGAMDEFNQNRAALLASVDVALEHAELFRADDDQMGLFLEESFSIK 899
BSNT_04269___ 898 PKYVETEELPLVDLLAFEKETLGIYFSNHPLSAFRKQLTAQGAVSILQAQ 947
|||||.||.||||.|.||||.||:|||:|||||||..|..:||.:|..|:
RBAM_026280__ 900 PKYVEAEEFPLVDKLRFEKEALGVYFSSHPLSAFRDLLKKRGAQAITAAR 949
BSNT_04269___ 948 RAVKRQLSLGVLLSKIKTIRTKTGQNMAFLTLSDETGEMEAVVFPEQFRQ 997
:..|.|||:|.||:.||||||||||:|||||||||||||||||||:|:|:
RBAM_026280__ 950 QMPKGQLSIGALLAGIKTIRTKTGQHMAFLTLSDETGEMEAVVFPDQYRR 999
BSNT_04269___ 998 LSPVLREGALLFTAGKCEVRQDKIQFIMSRAELLENMDAEKAPSVYIKIE 1047
|||:|.||||||.|||.|.||:|.|||||.|.|||..:|::|||||||||
RBAM_026280__ 1000 LSPLLEEGALLFAAGKMEERQEKTQFIMSSASLLEQTEADRAPSVYIKIE 1049
BSNT_04269___ 1048 SSQHSQEILAKIKRILLEHKGETGVYLYYERQKQTIKLPESFHINADHQV 1097
.|:|:||.|.|:||||||||||||||||||:.||||:||::|||.||||.
RBAM_026280__ 1050 GSRHNQEFLEKMKRILLEHKGETGVYLYYEKDKQTIRLPDTFHIQADHQA 1099
BSNT_04269___ 1098 LYRLKELLGQKNVVLKQW 1115
|||||||||::|||||
RBAM_026280__ 1100 LYRLKELLGRENVVLK-- 1115
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.