Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04258 and RBAM_026210
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:41
# Commandline: needle
# -asequence pep-align/BSNT_04258___ytvI.1.9828.seq
# -bsequence pep-align/RBAM_026210___ytvI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04258___ytvI-RBAM_026210___ytvI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04258___ytvI-RBAM_026210___ytvI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04258___ytvI
# 2: RBAM_026210___ytvI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 371
# Identity: 286/371 (77.1%)
# Similarity: 329/371 (88.7%)
# Gaps: 0/371 ( 0.0%)
# Score: 1487.0
#
#
#=======================================
BSNT_04258___ 1 MNQSYITIFFRTLFVISMTAGSIAAAYYSFPLTYPFLIALILSSVIHPVV 50
||..|.|:|||.|||::...|::||.|.||||||||||||||||.|.|||
RBAM_026210__ 1 MNPHYATVFFRALFVLAAAGGALAAGYASFPLTYPFLIALILSSAIIPVV 50
BSNT_04258___ 51 DYLDKVTGFPRTINVLGVLAFFLLAAFGVLTILVAEIVTGTAYLAKTLPP 100
|:|||:||.||::|.:.||.||||...|..|.|||||::|||||||||||
RBAM_026210__ 51 DWLDKLTGMPRSVNTVIVLVFFLLILLGAATFLVAEIISGTAYLAKTLPP 100
BSNT_04258___ 101 HISTFISYCEKLFTTHIQPLYNELTLLFQELETNQQASIVTHIQTLGDSA 150
|||.|::|||:|||:.|||||:|||:||..||||||||||||||||||:|
RBAM_026210__ 101 HISAFMTYCEELFTSRIQPLYHELTVLFNGLETNQQASIVTHIQTLGDTA 150
BSNT_04258___ 151 AKNAGLLLSHILEMIPRFFALLPNTAAVLIFSLLATFFMTKDWHKLKAML 200
||||||:|||:||::|::.|.|||||||.||::|||||||||||||||:|
RBAM_026210__ 151 AKNAGLMLSHLLELVPKWIAFLPNTAAVFIFAMLATFFMTKDWHKLKALL 200
BSNT_04258___ 201 VLILPDRVTANSKAISSELKKAMTGFIKAQAVLVFITMVIVFIGLSLLKV 250
..|||:||:||:||:|.||||||.|||||||||:..||:||||||.||.:
RBAM_026210__ 201 YSILPERVSANAKAVSGELKKAMAGFIKAQAVLILFTMIIVFIGLFLLGI 250
BSNT_04258___ 251 EHAATIAFLIGLVDLLPYLGAGSVFVPWILYLSITGQLPQAIGIGILYLV 300
||||||||.||||||||||||||||||||:||:|.||||||||:|:||:|
RBAM_026210__ 251 EHAATIAFFIGLVDLLPYLGAGSVFVPWIMYLAIAGQLPQAIGLGVLYIV 300
BSNT_04258___ 301 VLIQRQLTEPKILSKSIGIDPLATLIALFAGFKLFGFLGLIAGPAVLVII 350
||||||||||||||||||:|||||||||||||||||.|||.||||:||.|
RBAM_026210__ 301 VLIQRQLTEPKILSKSIGLDPLATLIALFAGFKLFGILGLAAGPALLVFI 350
BSNT_04258___ 351 QAFITTGALKEIWSYITVQQK 371
|||||||||||||:|||||.|
RBAM_026210__ 351 QAFITTGALKEIWAYITVQSK 371
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