Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
Amino acid alignment: BSNT_04248 and RBAM_026140

See DNA alignment / Visit BSNT_04248 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:40
# Commandline: needle
#    -asequence pep-align/BSNT_04248___phoR.1.9828.seq
#    -bsequence pep-align/RBAM_026140___phoR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04248___phoR-RBAM_026140___phoR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04248___phoR-RBAM_026140___phoR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04248___phoR
# 2: RBAM_026140___phoR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 585
# Identity:     415/585 (70.9%)
# Similarity:   496/585 (84.8%)
# Gaps:          12/585 ( 2.1%)
# Score: 2114.0
# 
#
#=======================================

BSNT_04248___      1 MNKYRVRLFSVFVVCMILVFCVLGLFLQQLFETSDQRKAEEHIEKEAKYL     50
                     |||.|||||::.|||:||||.|||||||.|..:|.:.:..:.::||:.|:
RBAM_026140__      1 MNKVRVRLFALLVVCIILVFSVLGLFLQHLISSSAEERTADQLKKESVYI     50

BSNT_04248___     51 ASLLDAGNLNNQANEKIIKDAGGALDVSASVIDTDGKVLYGSNGRSADSQ    100
                     |.|||.|.:.|::||.:|:|||..|.::.:|::..|..:|.|..| ||..
RBAM_026140__     51 AGLLDTGRIGNKSNETVIRDAGRTLGINVAVLNEKGDAVYHSGSR-ADDS     99

BSNT_04248___    101 KVQALVS---GHEGILSTTDNKLYYGLSLRSE-GEKTGYVLLSASEKSDG    146
                     .|:..:|   ..|.:.|  .:|:..|.::::: |:..||||:| ||.:.|
RBAM_026140__    100 AVKEFISHNKSEEAVQS--KSKVIRGTAVKNDAGKIAGYVLVS-SEINGG    146

BSNT_04248___    147 --LKGELWGMLTASLCTAFIVIVYFYSSMTSRYKRSIESATNVATELSKG    194
                       :.||:||||.||||||||:||:||::||||||:||::||.||||||||
RBAM_026140__    147 SSVTGEMWGMLAASLCTAFIIIVFFYTNMTSRYKKSIDAATKVATELSKG    196

BSNT_04248___    195 NYDARTYGGYIRRSDKLGHAMNSLAIDLMEMTRTQEMQRDRLLTVIENIG    244
                     |||||:|.||.||||:||.||||||:|||||||||:||||||||||||||
RBAM_026140__    197 NYDARSYSGYARRSDRLGRAMNSLAVDLMEMTRTQDMQRDRLLTVIENIG    246

BSNT_04248___    245 SGLIMIDGRGFINLVNRSYAKQFHINPNHMLRRLYHDAFEHEEVIQLVED    294
                     ||||:||||||||||||||.||||..|..:|||||||||||||:|:||||
RBAM_026140__    247 SGLILIDGRGFINLVNRSYTKQFHTKPERLLRRLYHDAFEHEEIIRLVED    296

BSNT_04248___    295 IFMTETKKCKLLRLPIKIERRYFEVDGVPIMGPDDEWKGIVLVFHDMTET    344
                     |||||||||:||||||.||||||||||||||||||||||||||||||||.
RBAM_026140__    297 IFMTETKKCQLLRLPINIERRYFEVDGVPIMGPDDEWKGIVLVFHDMTEI    346

BSNT_04248___    345 KKLEQMRKDFVANVSHELKTPITSIKGFTETLLDGAMEDKEALSEFLSII    394
                     |||||||||||||||||||||||||||||||||||||:|::|||:|||||
RBAM_026140__    347 KKLEQMRKDFVANVSHELKTPITSIKGFTETLLDGAMKDEKALSDFLSII    396

BSNT_04248___    395 LKESERLQSLVQDLLDLSKIEQQNFTLSIETFEPAKMLVEIETLLKHKAD    444
                     |||||||||||||||||||:||||||:.:|:|:.||:|.|||.||:|||:
RBAM_026140__    397 LKESERLQSLVQDLLDLSKMEQQNFTMRVESFDAAKILHEIEALLRHKAE    446

BSNT_04248___    445 EKGISLHLNVPKDPQYVSGDPYRLKQVFLNLVNNALTYTPEGGSVAINVK    494
                     |||||..|::|::|.:|:||.:|||||||||.|||||||||.|:|.|:|.
RBAM_026140__    447 EKGISFQLDLPEEPIFVTGDAHRLKQVFLNLANNALTYTPEKGTVGISVH    496

BSNT_04248___    495 PREKDIQIEVADSGIGIQKEEIPRIFERFYRVDKDRSRNSGGTGLGLAIV    544
                     .:|..:.|:|:|:|||||||||||||||||||||||||||||||||||||
RBAM_026140__    497 VKETVVDIKVSDTGIGIQKEEIPRIFERFYRVDKDRSRNSGGTGLGLAIV    546

BSNT_04248___    545 KHLIEAHEGKIDVTSEPGRGTVFTVTLKRAAEKSA    579
                     |||||||||||:||||||:||||||||||..|.  
RBAM_026140__    547 KHLIEAHEGKIEVTSEPGQGTVFTVTLKRQPEA--    579


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04248 and RBAM_026140

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
