Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04170 and RBAM_025640

See DNA alignment / Visit BSNT_04170 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:33
# Commandline: needle
#    -asequence pep-align/BSNT_04170___yshE.1.9828.seq
#    -bsequence pep-align/RBAM_025640___yshE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04170___yshE-RBAM_025640___yshE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04170___yshE-RBAM_025640___yshE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04170___yshE
# 2: RBAM_025640___yshE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 134
# Identity:     125/134 (93.3%)
# Similarity:   131/134 (97.8%)
# Gaps:           0/134 ( 0.0%)
# Score: 643.0
# 
#
#=======================================

BSNT_04170___      1 MSDFWENELVEIAAYYSVAVLCLVLFLTVFELVTAYKNWEEIQKGNLAVA     50
                     |:.|||||||||||||||||||||:|||||||||:||||.||||||||||
RBAM_025640__      1 MNAFWENELVEIAAYYSVAVLCLVIFLTVFELVTSYKNWVEIQKGNLAVA     50

BSNT_04170___     51 MATGGKILGIANVFQHSISQHNSLLQMIGWGVYGFVMLLISYFIFEFLTP    100
                     ||||||||||||||||||:||||||||||||||||:||||||||||||||
RBAM_025640__     51 MATGGKILGIANVFQHSIAQHNSLLQMIGWGVYGFIMLLISYFIFEFLTP    100

BSNT_04170___    101 RFKIDQEIENDNRAVGFISFVISVGLSFVVAAGI    134
                     |||||:|||.||||||||||||||||||||||||
RBAM_025640__    101 RFKIDKEIEKDNRAVGFISFVISVGLSFVVAAGI    134


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