Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04167 and RBAM_025610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:33
# Commandline: needle
# -asequence pep-align/BSNT_04167___ysiA.1.9828.seq
# -bsequence pep-align/RBAM_025610___ysiA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04167___ysiA-RBAM_025610___ysiA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04167___ysiA-RBAM_025610___ysiA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04167___ysiA
# 2: RBAM_025610___ysiA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 196
# Identity: 167/196 (85.2%)
# Similarity: 179/196 (91.3%)
# Gaps: 2/196 ( 1.0%)
# Score: 837.0
#
#
#=======================================
BSNT_04167___ 1 --MKQKRPKYMQIIDAAVEVIAENGYHQSQVSKIAKQAGVADGTIYLYFK 48
:.||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025610__ 1 MTLNQKRPKYMQIIDAAVEVIAENGYHQSQVSKIAKQAGVADGTIYLYFK 50
BSNT_04167___ 49 NKEDILISLFKEKMGQFIERMEEDIKEKATAKEKLALVISKHFSLLAGDH 98
|||||||||||||||||||||||::|||.||||||||||.:||:||..|.
RBAM_025610__ 51 NKEDILISLFKEKMGQFIERMEEEVKEKTTAKEKLALVIKQHFTLLGNDR 100
BSNT_04167___ 99 NLAIVTQLELRQSNLELRQKINEILKGYLNILDGILTEGIQSGELKEGLD 148
:|||||||||||||::||.|||:|||||||:||.||||||:|||.|:.||
RBAM_025610__ 101 HLAIVTQLELRQSNIKLRLKINDILKGYLNMLDTILTEGIKSGEWKDNLD 150
BSNT_04167___ 149 VRLARQMIFGTIDETVTTWVMNDQKYDLAALSDSVLELLVSGIHNK 194
||||||||||||||||||||||||||||..|||.||||||||||..
RBAM_025610__ 151 VRLARQMIFGTIDETVTTWVMNDQKYDLPDLSDKVLELLVSGIHQN 196
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