Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04150 and RBAM_025520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:32
# Commandline: needle
# -asequence pep-align/BSNT_04150___sdhC.1.9828.seq
# -bsequence pep-align/RBAM_025520___sdhC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04150___sdhC-RBAM_025520___sdhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04150___sdhC-RBAM_025520___sdhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04150___sdhC
# 2: RBAM_025520___sdhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 202
# Identity: 191/202 (94.6%)
# Similarity: 196/202 (97.0%)
# Gaps: 0/202 ( 0.0%)
# Score: 992.0
#
#
#=======================================
BSNT_04150___ 1 MSGNREFYFRRLHSLLGVIPVGIFLIQHLVVNQFAARGAEAFNSAAHFMD 50
|||||||||||||||||||||||||||||||||||||||:|||.||.|||
RBAM_025520__ 1 MSGNREFYFRRLHSLLGVIPVGIFLIQHLVVNQFAARGADAFNKAAGFMD 50
BSNT_04150___ 51 SLPFRYALEIFIIFLPLIYHAVYGVYIAFTAKNNAGQYSYMRNWLFVLQR 100
||||||||||||||||||||||||||||||||||||.|||.|||:|||||
RBAM_025520__ 51 SLPFRYALEIFIIFLPLIYHAVYGVYIAFTAKNNAGHYSYFRNWMFVLQR 100
BSNT_04150___ 101 VTGIITLIFVSWHVWETRIAAQMGAEVNFDMMANILSSPAMLGFYIVGVL 150
||||:||||||||||:|||||||||||||||||||||||.||||||||||
RBAM_025520__ 101 VTGILTLIFVSWHVWQTRIAAQMGAEVNFDMMANILSSPFMLGFYIVGVL 150
BSNT_04150___ 151 STIFHFSNGLWSFAVTWGITVTPRSQRISTYVTLIIFVALSYVGLKAIFA 200
|.|||||||||||||||||||||||||||||||||||:||||||||||||
RBAM_025520__ 151 SVIFHFSNGLWSFAVTWGITVTPRSQRISTYVTLIIFLALSYVGLKAIFA 200
BSNT_04150___ 201 FV 202
||
RBAM_025520__ 201 FV 202
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