Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04095 and RBAM_025240

See DNA alignment / Visit BSNT_04095 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:27
# Commandline: needle
#    -asequence pep-align/BSNT_04095.1.9828.seq
#    -bsequence pep-align/RBAM_025240___ysxD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04095-RBAM_025240___ysxD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04095-RBAM_025240___ysxD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04095
# 2: RBAM_025240___ysxD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 165
# Identity:     119/165 (72.1%)
# Similarity:   134/165 (81.2%)
# Gaps:           2/165 ( 1.2%)
# Score: 624.5
# 
#
#=======================================

BSNT_04095         1 MKQKSILFPCLLLAASVYAWLESGQAELFSGQDQWPVLLMLLGAAFVYQG     50
                     ||:.|||.|.||||||::|||:|||..||..|.:||||||||||..:|||
RBAM_025240__      1 MKKTSILLPGLLLAASLFAWLQSGQVHLFENQGEWPVLLMLLGAVLLYQG     50

BSNT_04095        51 KKEAVTPHFFIGLLLFGIGLHFFAKPKWVWWPDDFEMLLFMIGFSLLVSA    100
                     ||||..||..||:|||||||||||||:..|||.||||:||:.||||..:|
RBAM_025240__     51 KKEAAGPHVLIGMLLFGIGLHFFAKPELSWWPGDFEMILFVFGFSLFAAA    100

BSNT_04095       101 VQKKEYVYEAVSMICFSLFLYFFKQIMAWLESAHIPTALLKEYWPFVFIG    150
                       :||||||||:||.|||||||||||.|||||.||||...|.|||:||||
RBAM_025240__    101 --RKEYVYEAVAMIGFSLFLYFFKQITAWLESVHIPTEHFKTYWPYVFIG    148

BSNT_04095       151 ISLLLLLIKRKKSIR    165
                     ||||||.|||.|:||
RBAM_025240__    149 ISLLLLFIKRNKTIR    163


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.