Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03993 and RBAM_024620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence pep-align/BSNT_03993___yrvO.1.9828.seq
# -bsequence pep-align/RBAM_024620___yrvO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03993___yrvO-RBAM_024620___yrvO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03993___yrvO-RBAM_024620___yrvO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03993___yrvO
# 2: RBAM_024620___yrvO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 379
# Identity: 304/379 (80.2%)
# Similarity: 332/379 (87.6%)
# Gaps: 0/379 ( 0.0%)
# Score: 1564.0
#
#
#=======================================
BSNT_03993___ 1 MERIYLDHAATSPMDERVLEKMIPHFSGSFGNPSSIHSFGRESRKWVDEA 50
||||||||||||||||||||:|.|||.|||||||||||||||||||||||
RBAM_024620__ 1 MERIYLDHAATSPMDERVLEEMKPHFFGSFGNPSSIHSFGRESRKWVDEA 50
BSNT_03993___ 51 RAQIAAEIGAAEQEIIFTSGGTEADNLAIMGTALARKDLGRHIITTKIEH 100
||.||.||.|.||||||||||||||||||.|||.|||:.|:|||||.|||
RBAM_024620__ 51 RADIAREISAKEQEIIFTSGGTEADNLAIFGTAAARKNEGKHIITTAIEH 100
BSNT_03993___ 101 HAVLHTCEKLEEDGFDITYLDVDQNGRVSAKQVKEALRDDTILVTVMYGN 150
|||||.|||||||||::|||....:||:||.|||||||||||||||||||
RBAM_024620__ 101 HAVLHACEKLEEDGFEVTYLIPGPSGRISANQVKEALRDDTILVTVMYGN 150
BSNT_03993___ 151 NEVGTVQPIEEIGELLKEHKAYFHTDAVQAFGLLPIDVKNSHIDLLSVSG 200
|||||:|||:||||||..|:||||||||||||.:|||||.|.||:|||||
RBAM_024620__ 151 NEVGTIQPIDEIGELLSGHQAYFHTDAVQAFGYMPIDVKKSRIDMLSVSG 200
BSNT_03993___ 201 HKLNGPKGTGFLYASKDVKLSPLLFGGEQERKRRAGTENVPGIVGLKEAI 250
|||||||||||||.:::|||||:|.||||||||||||||||||.|||||:
RBAM_024620__ 201 HKLNGPKGTGFLYVNQEVKLSPILLGGEQERKRRAGTENVPGIAGLKEAV 250
BSNT_03993___ 251 KLSSEERDEKNEKYQSFKAIFADTLRDAGVAFEINGDKEHSLPHVLNLYF 300
.||:.||:||..||:.||.|...||..:||..|:|||.|..|||:|||||
RBAM_024620__ 251 VLSNREREEKTAKYKEFKNIIMSTLEKSGVTAEVNGDAEKCLPHILNLYF 300
BSNT_03993___ 301 PGVSVEALLVNLDMAGVAVSSGSACTAGSVLPSHVLTAMFGEESDRLTSS 350
|||.||||||||||.||||||||||||||||||||||||||.||.|||||
RBAM_024620__ 301 PGVPVEALLVNLDMEGVAVSSGSACTAGSVLPSHVLTAMFGSESGRLTSS 350
BSNT_03993___ 351 IRISFGLGNTAEQVKTAAKHVADVVKRLT 379
||:||||||||||::|||:.:|.|||||.
RBAM_024620__ 351 IRLSFGLGNTAEQIETAAEKLAAVVKRLA 379
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