Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03976 and RBAM_024500

See DNA alignment / Visit BSNT_03976 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:16
# Commandline: needle
#    -asequence pep-align/BSNT_03976___yrzL.1.9828.seq
#    -bsequence pep-align/RBAM_024500___yrzL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03976___yrzL-RBAM_024500___yrzL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03976___yrzL-RBAM_024500___yrzL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03976___yrzL
# 2: RBAM_024500___yrzL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 88
# Identity:      86/88 (97.7%)
# Similarity:    86/88 (97.7%)
# Gaps:           0/88 ( 0.0%)
# Score: 437.0
# 
#
#=======================================

BSNT_03976___      1 MSSFDKTMKFNFSDDSAETNVNEVLITVYDALQEKGYNPINQIVGYLLSG     50
                     |||||||||||||||||||||.|||.||||||||||||||||||||||||
RBAM_024500__      1 MSSFDKTMKFNFSDDSAETNVEEVLNTVYDALQEKGYNPINQIVGYLLSG     50

BSNT_03976___     51 DPAYIPRHRDARNLIRKLERDELIEELVKSYLEQHKEA     88
                     ||||||||||||||||||||||||||||||||||||||
RBAM_024500__     51 DPAYIPRHRDARNLIRKLERDELIEELVKSYLEQHKEA     88


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