Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_02035 and RBAM_024210

See DNA alignment / Visit BSNT_02035 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:44
# Commandline: needle
#    -asequence pep-align/BSNT_02035___manR.1.9828.seq
#    -bsequence pep-align/RBAM_024210___manR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02035___manR-RBAM_024210___manR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02035___manR-RBAM_024210___manR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02035___manR
# 2: RBAM_024210___manR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 650
# Identity:     511/650 (78.6%)
# Similarity:   590/650 (90.8%)
# Gaps:           2/650 ( 0.3%)
# Score: 2661.5
# 
#
#=======================================

BSNT_02035___      1 MEYINTRQKEILYLLLSEPDDYLVVQDFADRVQCSEKTIRNDLKVIEDYL     50
                     |:|:|:|||:||||||||||||||||||||||:|||||||||||.|||:|
RBAM_024210__      1 MKYMNSRQKKILYLLLSEPDDYLVVQDFADRVRCSEKTIRNDLKTIEDFL     50

BSNT_02035___     51 NEHSHAQLIRKPGLGVYLYIEEQERTWLSQQLHTEHFSSRQRSDEERMLH    100
                     |||:.|||||||||||||:|.||||:.||:|::.|||:.|.::||||:||
RBAM_024210__     51 NEHAQAQLIRKPGLGVYLHISEQERSRLSRQIYNEHFTCRHKTDEERILH    100

BSNT_02035___    101 IAYDLLMNPKPVSAKDIAARHFVNRSSIKKDLYAVEEWLKRFDLTLVSRQ    150
                     ||||||||.||||||:|||:|||||:|||||:.|||||||||||.|||:|
RBAM_024210__    101 IAYDLLMNSKPVSAKEIAAQHFVNRASIKKDVSAVEEWLKRFDLILVSKQ    150

BSNT_02035___    151 RLGLKVEGNERNKRKALARISDLIHNTAFTSQFIKSKFLHYEVDFVTKEI    200
                     |||||:||:|:|||||||||||||.|..|||||||||||.||.|||.|||
RBAM_024210__    151 RLGLKIEGDEKNKRKALARISDLIDNAEFTSQFIKSKFLSYEADFVRKEI    200

BSNT_02035___    201 KSLQKKHSLYFTDETFESLLLHTLLMVRRIKMKQPISLSPKEMAAVKKKK    250
                     |.|||.||:||||||||||||||||.:||||||||:::|.:::.||||||
RBAM_024210__    201 KLLQKNHSIYFTDETFESLLLHTLLTIRRIKMKQPVAISARQLDAVKKKK    250

BSNT_02035___    251 EYQWTFACLQRLEPVFAIRFPEEEAVYLTLHILGGKVRYPLQTEE--NLE    298
                     ||:||.|||:||||||||||||||||||||||:|||||||.|.|:  :||
RBAM_024210__    251 EYEWTLACLKRLEPVFAIRFPEEEAVYLTLHIIGGKVRYPSQLEKKLDLE    300

BSNT_02035___    299 NAVLPKVVGHLINRVSELKMMDFHKDQDLINGLNIHLNTVLQRLSYDLSV    348
                     ::.|.|||.|||||||||:|:||:|||:|||||||||:.||:||||||||
RBAM_024210__    301 DSELSKVVRHLINRVSELQMLDFYKDQELINGLNIHLDPVLKRLSYDLSV    350

BSNT_02035___    349 ANPMLNDIKKMYPYLFHLIIDVLEDINHTFDLQIPEEEAAYLTLHFQAAI    398
                     :||||:|||||||||||||||||||||.||||.|||||||||||||||||
RBAM_024210__    351 SNPMLHDIKKMYPYLFHLIIDVLEDINQTFDLYIPEEEAAYLTLHFQAAI    400

BSNT_02035___    399 ERMQCSSETHKKAIIVCHMGIGMSQLLRTKIERKCHQIAVMACIAKADLK    448
                     ||::.:|...|:.|||||||||||||||||||||.|.|.|..|||||:|.
RBAM_024210__    401 ERLRRNSHNPKRTIIVCHMGIGMSQLLRTKIERKFHYITVKDCIAKAELT    450

BSNT_02035___    449 DYIKKHEDIDLVISTIALENITVPHIVVSPLLEPGEEKKLSAFIRQLGES    498
                     :|||||:|||.|||||.|.|:|:||||||||||..:|||||||::||..|
RBAM_024210__    451 EYIKKHKDIDFVISTIGLGNVTIPHIVVSPLLESADEKKLSAFLQQLDIS    500

BSNT_02035___    499 HRQKQKTFQMLNNTTPFLVFLQQEAEHRYKLIEQLATALFEKGYVDKDYA    548
                     ||::||||:|||:|||||||||||.||||::||:||.||:|||||:|:|.
RBAM_024210__    501 HRREQKTFKMLNDTTPFLVFLQQETEHRYQVIEKLAQALYEKGYVEKEYG    550

BSNT_02035___    549 VHVVMREKMSATNIGSGIAIPHANAKFIKQSAIAIATLKEPLEWGNEKVS    598
                     :|.||||||||||||:||||||||:|:||||||||||||||:|||.||||
RBAM_024210__    551 IHAVMREKMSATNIGAGIAIPHANSKYIKQSAIAIATLKEPIEWGTEKVS    600

BSNT_02035___    599 LVFMLAVKHEDQTMTKQLFSELSYLSEQPAFVQKLTKEANVMTFLSHLDY    648
                     :|||||||||||...||||||||||||||||:||||:|.|||.|||:|:|
RBAM_024210__    601 VVFMLAVKHEDQNKVKQLFSELSYLSEQPAFIQKLTEEKNVMMFLSYLNY    650


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.