Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03826 and RBAM_024020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:09
# Commandline: needle
# -asequence pep-align/BSNT_03826___yqeD.1.9828.seq
# -bsequence pep-align/RBAM_024020___yqeD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03826___yqeD-RBAM_024020___yqeD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03826___yqeD-RBAM_024020___yqeD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03826___yqeD
# 2: RBAM_024020___yqeD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 208
# Identity: 142/208 (68.3%)
# Similarity: 175/208 (84.1%)
# Gaps: 0/208 ( 0.0%)
# Score: 781.0
#
#
#=======================================
BSNT_03826___ 1 MLKKVIGILVIIAIIAVGFFQKEAWLDAIKAGGMFSVLFSMLLIAADVFF 50
|:||...:.||||::.:||.||:.||..|:||||::||.|:||:||||||
RBAM_024020__ 1 MIKKGFSLAVIIAVVMIGFMQKDVWLSMIRAGGMYAVLMSILLVAADVFF 50
BSNT_03826___ 51 PIVPFALVAALNGAVFGTANGIWITLTGSMLGTILLFFLARYSFRDWARK 100
||||||::|||||||||..||:||||:|:||||:.||||.||.|||||||
RBAM_024020__ 51 PIVPFAIIAALNGAVFGIVNGVWITLSGAMLGTMALFFLVRYGFRDWARK 100
BSNT_03826___ 101 KVQAYPAIQSYEASFNKNAFTAVLLGRLIPVIPSLIMNVICGLSQVRWHV 150
|:.||||...||.||:::||||||.|||||:||||.||.:||||.:||.:
RBAM_024020__ 101 KLLAYPAAAQYEDSFHQHAFTAVLFGRLIPIIPSLAMNTVCGLSNIRWPI 150
BSNT_03826___ 151 FFFASLIGKIPNIVVVTIAGANFTSNKLLSISIYGAYILIIMLVIYKKFP 200
||.||::|||||||:||:|||:||||||||..|||.|:|::|.|||||||
RBAM_024020__ 151 FFSASVLGKIPNIVIVTVAGASFTSNKLLSFGIYGMYMLVLMAVIYKKFP 200
BSNT_03826___ 201 HLLKVPKK 208
.|||..||
RBAM_024020__ 201 GLLKTTKK 208
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