Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03789 and RBAM_023750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:06
# Commandline: needle
# -asequence pep-align/BSNT_03789___prmA.1.9828.seq
# -bsequence pep-align/RBAM_023750___prmA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03789___prmA-RBAM_023750___prmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03789___prmA-RBAM_023750___prmA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03789___prmA
# 2: RBAM_023750___prmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 311
# Identity: 293/311 (94.2%)
# Similarity: 304/311 (97.7%)
# Gaps: 0/311 ( 0.0%)
# Score: 1520.0
#
#
#=======================================
BSNT_03789___ 1 MKWSELSIHTTHEAVEPISNILHEAGASGVVIEDPLDLIKERENVYGEIY 50
|||||:||||||||||||||||||||||||||||||||:|||||||||||
RBAM_023750__ 1 MKWSEISIHTTHEAVEPISNILHEAGASGVVIEDPLDLMKERENVYGEIY 50
BSNT_03789___ 51 QLDPNDYPDEGVIVKAYLPVNSFLGETVDGIKETINNLLLYNIDLGRNHI 100
|||||||||||||||||||:|||||||||||||||||||||:||||||.|
RBAM_023750__ 51 QLDPNDYPDEGVIVKAYLPINSFLGETVDGIKETINNLLLYDIDLGRNTI 100
BSNT_03789___ 101 TISEVNEEEWATAWKKYYHPVKISEKFTIVPTWEEYTPVHTDELIIEMDP 150
||||||||||||||||||||||||||||||||||.|||||||||||||||
RBAM_023750__ 101 TISEVNEEEWATAWKKYYHPVKISEKFTIVPTWETYTPVHTDELIIEMDP 150
BSNT_03789___ 151 GMAFGTGTHPTTVLCIQALERFVQKGDKVIDVGTGSGILSIAAAMLKAES 200
|||||||||||||||||||||.|||||:||||||||||||||||||:|||
RBAM_023750__ 151 GMAFGTGTHPTTVLCIQALERIVQKGDRVIDVGTGSGILSIAAAMLEAES 200
BSNT_03789___ 201 VHAYDLDPVAVESARLNLKLNKVSDIAQVKQNNLLDGIEGEHDVIVANIL 250
|||||||||||||||||:|||||||.|:||||||||||.|||||||||||
RBAM_023750__ 201 VHAYDLDPVAVESARLNVKLNKVSDTAEVKQNNLLDGITGEHDVIVANIL 250
BSNT_03789___ 251 AEVILRFTSQAYSLLKEGGHFITSGIIGHKKQEVKEALEQAGFTIVEILS 300
||||||||||||.|||:|||||||||||.||||||||||:|||||:||||
RBAM_023750__ 251 AEVILRFTSQAYDLLKDGGHFITSGIIGQKKQEVKEALEKAGFTIIEILS 300
BSNT_03789___ 301 MEDWVSIIAKK 311
|||||||||||
RBAM_023750__ 301 MEDWVSIIAKK 311
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