Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03751 and RBAM_023470

See DNA alignment / Visit BSNT_03751 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence pep-align/BSNT_03751___ispH.1.9828.seq
#    -bsequence pep-align/RBAM_023470___ispH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03751___ispH-RBAM_023470___ispH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03751___ispH-RBAM_023470___ispH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03751___ispH
# 2: RBAM_023470___ispH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity:     287/314 (91.4%)
# Similarity:   303/314 (96.5%)
# Gaps:           0/314 ( 0.0%)
# Score: 1498.0
# 
#
#=======================================

BSNT_03751___      1 MDVIKISPRGYCYGVVDAMVIAKNASLDKSLPRPIYILGMIVHNKHVTDA     50
                     |||||||||||||||||||||||||||||:||||||||||||||||||||
RBAM_023470__      1 MDVIKISPRGYCYGVVDAMVIAKNASLDKTLPRPIYILGMIVHNKHVTDA     50

BSNT_03751___     51 FEEEGIFTLDGSNRLDILKQVDKGTVIFTAHGVSPEVRRIAEEKGLVAID    100
                     |||:||:||||:|||:|||||:||||||||||||||||:.|||||||.||
RBAM_023470__     51 FEEDGIYTLDGTNRLEILKQVEKGTVIFTAHGVSPEVRKAAEEKGLVTID    100

BSNT_03751___    101 ATCPDVTKTHNLILEMKEKGYHVIYIGKKGHPEPEGAVGVAPEIVHLVET    150
                     ||||||||||:||.::|.:|||||||||||||||||||||||||||||||
RBAM_023470__    101 ATCPDVTKTHDLIRKVKAEGYHVIYIGKKGHPEPEGAVGVAPEIVHLVET    150

BSNT_03751___    151 EEDVKNLDIQAEKLIVTNQTTMSQWDVHDIMELVKEKYPHVEYHQEICLA    200
                     ||||:|||||||||||||||||||||||||||.||||||:||||||||||
RBAM_023470__    151 EEDVRNLDIQAEKLIVTNQTTMSQWDVHDIMESVKEKYPYVEYHQEICLA    200

BSNT_03751___    201 TQVRQEAVSEQAKKADLTIVVGDPKSNNSNRLAQVSEEIAGTKAYRIGDL    250
                     |||||||||||||||||||||||||||||||||||||||||||||||||:
RBAM_023470__    201 TQVRQEAVSEQAKKADLTIVVGDPKSNNSNRLAQVSEEIAGTKAYRIGDI    250

BSNT_03751___    251 SELKLEWLKGVNTVAVTAGASTPTPITKEVIRFLEQFDHEDPSTWTTEHN    300
                     |||||||||.|||||||||||||||||||||||||||||.|.|||..||:
RBAM_023470__    251 SELKLEWLKDVNTVAVTAGASTPTPITKEVIRFLEQFDHNDESTWQLEHS    300

BSNT_03751___    301 IPLKKILPKVKAKN    314
                     :||||||||||.||
RBAM_023470__    301 VPLKKILPKVKIKN    314


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