Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03740 and RBAM_023390

See DNA alignment / Visit BSNT_03740 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence pep-align/BSNT_03740___yqfX.1.9828.seq
#    -bsequence pep-align/RBAM_023390___yqfX.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03740___yqfX-RBAM_023390___yqfX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03740___yqfX-RBAM_023390___yqfX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03740___yqfX
# 2: RBAM_023390___yqfX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:      97/158 (61.4%)
# Similarity:   109/158 (69.0%)
# Gaps:          35/158 (22.2%)
# Score: 470.5
# 
#
#=======================================

BSNT_03740___      1 MTLTEKFSKHESGKMDQTIKAPLIKQKGELKVANDYEKRDNNSYYVDHGS     50
                                                    :|.|||.|..|.|||||||
RBAM_023390__      1 -------------------------------MAYDYENRKGNDYYVDHGS     19

BSNT_03740___     51 EGTNITRDNDGFFEETAAEIAEPYRAADRSNDQDNDRSDGNVNEGRGIGY    100
                     |||:|||  |.:.|||||||:|||||:||:.|:|::| || |:|||||||
RBAM_023390__     20 EGTDITR--DVYSEETAAEISEPYRASDRAADRDDNR-DG-VSEGRGIGY     65

BSNT_03740___    101 IALALSIISLFVLPVLLGAAGIIVGYIARRRGAQGLGAWAMGIGVVSLVL    150
                     .|||:||||||||||||||.|||||||||||||..||.||||||:|||||
RBAM_023390__     66 AALAISIISLFVLPVLLGACGIIVGYIARRRGAGALGGWAMGIGIVSLVL    115

BSNT_03740___    151 GIFIIPFF    158
                     ||||.|||
RBAM_023390__    116 GIFITPFF    123


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