Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01659 and RBAM_023190
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:19
# Commandline: needle
# -asequence pep-align/BSNT_01659___nhaC.1.9828.seq
# -bsequence pep-align/RBAM_023190___nhaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01659___nhaC-RBAM_023190___nhaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01659___nhaC-RBAM_023190___nhaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01659___nhaC
# 2: RBAM_023190___nhaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 454
# Identity: 363/454 (80.0%)
# Similarity: 415/454 (91.4%)
# Gaps: 1/454 ( 0.2%)
# Score: 1887.0
#
#
#=======================================
BSNT_01659___ 1 MDSQKKLTFPLAVGLFILMLCIIISCLFLLHVEPHIPLFLSVVMLSAAAL 50
|..:|:|||..|:.||:|||.:||||||..|.|||:|||..|::||.|.|
RBAM_023190__ 1 MKQEKRLTFISAISLFVLMLAVIISCLFFFHTEPHMPLFFCVIILSLAGL 50
BSNT_01659___ 51 WFGFSWKSIEKGIVDGIKNGVQPIIVLALIGILIGAWMYSGAIPTVTVYA 100
|.||||.|:|||||.|:||||||||||||||:||||||||||||||||||
RBAM_023190__ 51 WLGFSWDSLEKGIVSGLKNGVQPIIVLALIGVLIGAWMYSGAIPTVTVYA 100
BSNT_01659___ 101 LSFIEPSHLLLTALFSCMIISTLVGSSLTTVSTIGVALIGVSSAASVPLE 150
||.|:||.||||||||||||||||||||||||||||||:||:|||.||||
RBAM_023190__ 101 LSIIQPSQLLLTALFSCMIISTLVGSSLTTVSTIGVALLGVASAAGVPLE 150
BSNT_01659___ 151 WTAGAVICGACFGDKMSPMSDTTNFAAGIGEIPIFEHIRHMMGTTIPALL 200
|||||||||||||||||||||||||||||||||||:|||||||||:||||
RBAM_023190__ 151 WTAGAVICGACFGDKMSPMSDTTNFAAGIGEIPIFKHIRHMMGTTVPALL 200
BSNT_01659___ 201 ITVVLFYFLGSSVSADAASTENIQQVITGIKDAANVTPWALLSPLLVVLL 250
||:||||.||||||.:||||:||..||:|||:|.:||||:|||||||::|
RBAM_023190__ 201 ITIVLFYILGSSVSINAASTQNIDAVISGIKEAVHVTPWSLLSPLLVIIL 250
BSNT_01659___ 251 AIKRVSVIPVLTAGIISSGILTAIFVPDSSLQAFMTALQNGTTFETDNEA 300
|::||||||||||||||:|:|||:|:||||:|.|::|||:||.|:|.::|
RBAM_023190__ 251 AVRRVSVIPVLTAGIISAGLLTAVFIPDSSIQGFISALQSGTAFKTGDQA 300
BSNT_01659___ 301 AAKIINRGGLQSMMGSVSLIMIAFALGGLMEKIGLISALLEGVMKGIRSK 350
.|.|||||||||||||||||||||||||||||.|||:|||:|::||:.:|
RBAM_023190__ 301 VASIINRGGLQSMMGSVSLIMIAFALGGLMEKTGLIAALLQGLIKGVHTK 350
BSNT_01659___ 351 GRLVAATVCSSIGVNLATGEQYLSILIPGQSFKSLYDKRNIQRKFLTRSL 400
|||:.|||.||||||||||||||||||||||:|:||||.:|:|..|.|||
RBAM_023190__ 351 GRLIMATVFSSIGVNLATGEQYLSILIPGQSYKALYDKLSIKRIHLARSL 400
BSNT_01659___ 401 EDGGTLINPLIPWGVSGAFMASALGVPVIDYIPFTFFLYISPMISILIGF 450
||||||||||||||||||||||||||.||||:|||||||||||||||:||
RBAM_023190__ 401 EDGGTLINPLIPWGVSGAFMASALGVSVIDYLPFTFFLYISPMISILLGF 450
BSNT_01659___ 451 VKK- 453
:||
RBAM_023190__ 451 LKKS 454
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