Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03710 and RBAM_023170

See DNA alignment / Visit BSNT_03710 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence pep-align/BSNT_03710___glcK.1.9828.seq
#    -bsequence pep-align/RBAM_023170___glcK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03710___glcK-RBAM_023170___glcK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03710___glcK-RBAM_023170___glcK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03710___glcK
# 2: RBAM_023170___glcK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     266/321 (82.9%)
# Similarity:   295/321 (91.9%)
# Gaps:           1/321 ( 0.3%)
# Score: 1408.0
# 
#
#=======================================

BSNT_03710___      1 MDEIWFAGIDLGGTTIKLAFINQYGEIQHKWEVPTDKTGDTITVTIAKTI     50
                     |::.||||||||||||||||||.||||||||||||||:|:||||||||.:
RBAM_023170__      1 MEDTWFAGIDLGGTTIKLAFINMYGEIQHKWEVPTDKSGNTITVTIAKAL     50

BSNT_03710___     51 DSKLDELQKPKHIIKYIGMGAPGPVDMAAGVVYETVNLGWKNYALKNHLE    100
                     |.||:||.|||.|:|:|||||||||:||.|:||||.|:|||||.||:|||
RBAM_023170__     51 DQKLEELNKPKRIVKWIGMGAPGPVEMATGMVYETTNMGWKNYPLKDHLE    100

BSNT_03710___    101 TETGIPAVIENDANIAALGEMWKGAGDGAKDVILVTLGTGVGGGIIANGE    150
                     .||||.||||||||||||||||||||||||||||||||||||||||.|||
RBAM_023170__    101 AETGISAVIENDANIAALGEMWKGAGDGAKDVILVTLGTGVGGGIIVNGE    150

BSNT_03710___    151 IVHGINGAGGEIGHICSIPEGGAPCNCGKTGCIETIASATGIVRIAKEKI    200
                     ||||.||||||||||||||||||||||||:|||||||||||||||||||:
RBAM_023170__    151 IVHGKNGAGGEIGHICSIPEGGAPCNCGKSGCIETIASATGIVRIAKEKL    200

BSNT_03710___    201 ANVKKMTRLKATEQLSARDVFEAAGENDEIALEVVDYVAKHLGLVLGNLA    250
                     |.|...:.|:..: |:||||||||.:.|:.||||||||||||||||||||
RBAM_023170__    201 AAVSDSSLLQVRD-LTARDVFEAAKQQDKTALEVVDYVAKHLGLVLGNLA    249

BSNT_03710___    251 SSLNPSKIVLGGGVSRAGELLRSKVEKTFRKCAFPRAAQAADISIAALGN    300
                     |::||:|||||||||:|||:||||||:||:..||||:|:|||||||||||
RBAM_023170__    250 SAMNPTKIVLGGGVSKAGEILRSKVEETFKITAFPRSAEAADISIAALGN    299

BSNT_03710___    301 DAGVIGGAWIAKNEWLKHQNC    321
                     |||||||||||||||||||||
RBAM_023170__    300 DAGVIGGAWIAKNEWLKHQNC    320


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.