Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03706 and RBAM_023160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence pep-align/BSNT_03706___yqgT.1.9828.seq
# -bsequence pep-align/RBAM_023160___yqgT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03706___yqgT-RBAM_023160___yqgT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03706___yqgT-RBAM_023160___yqgT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03706___yqgT
# 2: RBAM_023160___yqgT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 377
# Identity: 235/377 (62.3%)
# Similarity: 300/377 (79.6%)
# Gaps: 4/377 ( 1.1%)
# Score: 1292.0
#
#
#=======================================
BSNT_03706___ 1 MAFITVKPEIKNNLANVAKELKIDEELLKSANRSAQKHQLYCPGYVIEEH 50
||.|.||||:|.::.::||.|.|||:|||:|:::|:..:|:|||:.:...
RBAM_023160__ 1 MAGIRVKPELKQHMKDIAKVLSIDEKLLKAADKTAENDELFCPGFAVSGQ 50
BSNT_03706___ 51 S-GKELQTIQDIKRFLQPRQLKLS-DSWIEQEKIYDDSAVEKEIKKIIDV 98
| |..|:|:..:.|:::..:..|| |.|:::||:|...:|.:||:||.||
RBAM_023160__ 51 SEGPPLETLSGLSRYIRHCERILSADQWVKEEKVYGSQSVYEEIEKITDV 100
BSNT_03706___ 99 FPFVSCREIGRSVLGRPIWELKAGGEHAVKKVHMNASFHANEWITTSVLL 148
||||:||:||.||||:|::|||.|.:.|.:|||:||||||||||||||.|
RBAM_023160__ 101 FPFVTCRKIGSSVLGKPLYELKIGADTAERKVHVNASFHANEWITTSVAL 150
BSNT_03706___ 149 KWLKEYCMSLCCNSPFFGFSPIKLFNSTSLSLVPLVNPDGVDLVLNGSEV 198
||.||||.:||.|...||.|.:.:|:.||||.|||||||||||||.|.|.
RBAM_023160__ 151 KWCKEYCAALCENKTVFGHSALDIFSLTSLSFVPLVNPDGVDLVLYGCED 200
BSNT_03706___ 199 MGARRDELERLNEHRPNFNEWKANINGVDLNKQFPSLWEIEKYRKPTAPS 248
:..:.:.|.|||||||:|.|||||||||||||.|||.|:||:.|||.|||
RBAM_023160__ 201 LSEKNEFLNRLNEHRPDFREWKANINGVDLNKHFPSNWDIEQRRKPKAPS 250
BSNT_03706___ 249 YRDFPGISPLTEPESIAMYRLITENPPDRLLALHTQGEEIYWGYKGLEPE 298
||||||.:||||||:.||:|||||.|||||:|||||||||||||:|.|||
RBAM_023160__ 251 YRDFPGTAPLTEPEAQAMHRLITEQPPDRLIALHTQGEEIYWGYEGCEPE 300
BSNT_03706___ 299 ESAAVIKDFEELSGNIYKGVRDIDSYAGFRDWFIHHYFKEGYTVELGKGQ 348
:|:.:|::||.:|||.|:||:.|||:||||||||..|.|||||:|||||:
RBAM_023160__ 301 QSSRMIREFEAISGNRYQGVKTIDSHAGFRDWFIQQYGKEGYTIELGKGK 350
BSNT_03706___ 349 NPLPFQQFSHIYNATNGILWRALFFHE 375
|||||.||:.||.||.|||||:|.|
RBAM_023160__ 351 NPLPFHQFADIYQATEGILWRSLVF-- 375
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