Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03704 and RBAM_023150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence pep-align/BSNT_03704___yqgU.1.9828.seq
# -bsequence pep-align/RBAM_023150___yqgU.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03704___yqgU-RBAM_023150___yqgU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03704___yqgU-RBAM_023150___yqgU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03704___yqgU
# 2: RBAM_023150___yqgU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 358
# Identity: 158/358 (44.1%)
# Similarity: 238/358 (66.5%)
# Gaps: 13/358 ( 3.6%)
# Score: 838.0
#
#
#=======================================
BSNT_03704___ 1 ---MLMRSVCFILLAVLLFSLSACEPSHQQQKQASAAKDEKKDIIPLSSE 47
.|:|.:..:||:.|:..|:|||||||||....:||..::.|:|||.:
RBAM_023150__ 1 MEGRLVRYLVCVLLSALVLCLAACEPSHQQQDTGVSAKSAEQKIVPLSKK 50
BSNT_03704___ 48 KADGAEGWLNNSTILYTASNPTKTELFAYRIFTGKAKKLYQTDGQIVDVQ 97
:|:..||||:|.||||||.: :|..|.:|:||:::||:|.|.||:|:
RBAM_023150__ 51 EAEKTEGWLDNRTILYTAHH----QLMKYDLFSGKSERLYETKGNIVNVK 96
BSNT_03704___ 98 INAREQMILLQITHSQKTAVVLLNAEGETLYEKDYETYELEAAWNQYDPY 147
|:.::|:||:|:|.|.:|.:||:|.:|:.||.|.:.:||||.|||.||||
RBAM_023150__ 97 ISRKKQLILIQVTSSGQTELVLMNKQGKRLYHKAFNSYELETAWNPYDPY 146
BSNT_03704___ 148 QMMVTEFNENWDFHTYQVNAKKDESFLSPVQVPFIHWTSKNTFDYVKEGR 197
|||:|.|.|.|||..|..:........||||.||:||||.:.|.|:|:|:
RBAM_023150__ 147 QMMITVFTETWDFTAYTADMNNGILKKSPVQAPFVHWTSTDEFQYIKQGK 196
BSNT_03704___ 198 DDKTGPLYTFDTASKTEQKLEDDVLFFDSFHQMSFTVKSA--SGGKGTYQ 245
.::.||||::|..:|.|:::...|::.||...|:..|:.. |.|.|.:.
RBAM_023150__ 197 TEEEGPLYSYDLQTKKEKRVLHHVIWADSRPGMTIAVRQTDQSDGDGEFL 246
BSNT_03704___ 246 FKTPQSTSPVTAKWPLQAKYTNLAPMEYDYDEAGGLFYTFKQSGDAYKLA 295
|:.|.| ||.::|||.||.:.||||||||:....||.||..|.:|.|.
RBAM_023150__ 247 FQKPAS---VTHRFPLQEKYQSFAPMEYDYDQTHKRFYIFKPEGRSYNLI 293
BSNT_03704___ 296 AINVASGETKDLVSLREMEPIQISPNGKYALYGFHFEQIILLKSHETKQL 345
:.::.....:.::...|||||||||||:||||||.::::|.||:..|:.:
RBAM_023150__ 294 SFDLGDERERTVLKNTEMEPIQISPNGEYALYGFTYDRLISLKTGMTEPI 343
BSNT_03704___ 346 IIDQKEME 353
|.::|.:
RBAM_023150__ 344 ITNEKGV- 350
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