Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03702 and RBAM_023130

See DNA alignment / Visit BSNT_03702 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence pep-align/BSNT_03702___yqgW.1.9828.seq
#    -bsequence pep-align/RBAM_023130___yqgW.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03702___yqgW-RBAM_023130___yqgW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03702___yqgW-RBAM_023130___yqgW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03702___yqgW
# 2: RBAM_023130___yqgW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 57
# Identity:      47/57 (82.5%)
# Similarity:    51/57 (89.5%)
# Gaps:           0/57 ( 0.0%)
# Score: 235.0
# 
#
#=======================================

BSNT_03702___      1 MLLVVIFGLVALFALWGVLRSVRNKNILGFLLAGATLFVFGWFTVMTVIN     50
                     ||||||||||||.|:.||||:||.:||||||||.|||.||||||||||:.
RBAM_023130__      1 MLLVVIFGLVALLAVLGVLRAVRQRNILGFLLAAATLGVFGWFTVMTVVT     50

BSNT_03702___     51 SGYPTAH     57
                     |||||||
RBAM_023130__     51 SGYPTAH     57


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