Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03698 and RBAM_023100

See DNA alignment / Visit BSNT_03698 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence pep-align/BSNT_03698___yqgZ.1.9828.seq
#    -bsequence pep-align/RBAM_023100___yqgZ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03698___yqgZ-RBAM_023100___yqgZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03698___yqgZ-RBAM_023100___yqgZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03698___yqgZ
# 2: RBAM_023100___yqgZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 127
# Identity:     106/127 (83.5%)
# Similarity:   115/127 (90.6%)
# Gaps:           2/127 ( 1.6%)
# Score: 559.0
# 
#
#=======================================

BSNT_03698___      1 MEQQLTFYSYPSCTSCRKTKHWLKAHQIEFNERHLFRETPTREELKYILS     50
                      .::|.||||||||||||||||||||.::|.||||||||||.:|||.|||
RBAM_023100__      1 -MKELIFYSYPSCTSCRKTKHWLKAHNVDFQERHLFRETPTIDELKQILS     49

BSNT_03698___     51 LTTEGIDEILATRSQTFKNLNLNIEEMTVNEVLELLIEKPKLLRRPILVD    100
                     |||||||||||||||||||||||||||||||||:||.|||||||||||:|
RBAM_023100__     50 LTTEGIDEILATRSQTFKNLNLNIEEMTVNEVLKLLTEKPKLLRRPILID     99

BSNT_03698___    101 NKKLVIGYNPGELLKLSKKKTVHQSA-    126
                     ..|||||||||||:||:||||||||. 
RBAM_023100__    100 RNKLVIGYNPGELMKLTKKKTVHQSVS    126


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