Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03685 and RBAM_023040

See DNA alignment / Visit BSNT_03685 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:58
# Commandline: needle
#    -asequence pep-align/BSNT_03685___comGB.1.9828.seq
#    -bsequence pep-align/RBAM_023040___comGB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03685___comGB-RBAM_023040___comGB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03685___comGB-RBAM_023040___comGB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03685___comGB
# 2: RBAM_023040___comGB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity:     212/345 (61.4%)
# Similarity:   260/345 (75.4%)
# Gaps:          22/345 ( 6.4%)
# Score: 1095.0
# 
#
#=======================================

BSNT_03685___      1 ----------------------MTAGGYTLLDGLRLMELQMNKRQAADLT     28
                                           ||..||:|::||||::||::|||.|:||
RBAM_023040__      1 MKRINRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLQLQLHKRQLAELT     50

BSNT_03685___     29 GSVTCLREGAPFYQVLKSLSFHKEAVGICYFAETHGELPASMIQSGELLE     78
                     ..:..||:|..|||||::||||||||.||||||.|||||.:|.||||||:
RBAM_023040__     51 DGIRRLRQGDAFYQVLEALSFHKEAVSICYFAEKHGELPGAMKQSGELLQ    100

BSNT_03685___     79 RKIAQADQLKSVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETS    128
                     ||:.|.||:|.:||||:|||.:|.||||:|||:|||||:||||||||.||
RBAM_023040__    101 RKLMQTDQIKKMLRYPMFLISSVCVMFYILQSLIIPQFAGIYQSMNMNTS    150

BSNT_03685___    129 RSTDMLFAFFQHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRI    178
                     .:|..:||||:|......|.:.....:.:|.|.:.|||||..:|||.::|
RBAM_023040__    151 GATAFIFAFFRHFHEACALALSAAFCLFLYVWFLCKKKSPQDKMLIVVKI    200

BSNT_03685___    179 PLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQTFLPFYRCEAE    228
                     ||:||...|||||||||||||||||||||||||.|||.|:||||||.|||
RBAM_023040__    201 PLLGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQSFLPFYREEAE    250

BSNT_03685___    229 QLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFI    278
                     .||.||||||:||||:.|.|.||.||:..:||||.:|.|.|||:|||||:
RBAM_023040__    251 MLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGLLHRELYTYSQFM    300

BSNT_03685___    279 LQRLEHKAQKWTGILQPMIYGFVAAMILLVYLSMLVPMYQMMNQM    323
                     ::|||..|.|:||||||:|||.||.|||:||:|||:|||||||||
RBAM_023040__    301 MERLEQNAAKYTGILQPVIYGVVAGMILIVYMSMLMPMYQMMNQM    345


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